Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2224 ATGGTGTCGTCGACGAAGACGAAATCCGAAAACAAACTATCACTTTTAGGTTTTATATGGGCCGGGTCATGCCATTTTGGCCCATTGGGTCTATTTTGGAAGAAGCTCTGCAAACGAACCCTTAAGCTTGTTCGTAAAGCTGCTGAGCACAAGTGCATAAAGAGAGGTGTGAAGGAAGTTGTCAAAAGCATAAGGCGTGGTAATAAAGGATTGTGTGTTATAGCTGGGAACATATCACCAATTGATGTCATCACTCATGTTCCTGTTTTGTGTGAAGAATCAGAGATTCCCTATGTATATGTCCCTTCTAAAGAAGACCTTGCAAGTGCGGGAGCAACAAAGAGGCCTACTTGCTGTGTTTTGGTGATGACCAAACCTGCAAAGGGAGAACTAGGGCAAGAGGAAAAAGAGAAATTGAAGTCTGATTATGATCAAGTTGTATCTGAAGTTAATGAGATCACAGCTTCACTTTTTTGA 477 0.4172 MVSSTKTKSENKLSLLGFIWAGSCHFGPLGLFWKKLCKRTLKLVRKAAEHKCIKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPVLCEESEIPYVYVPSKEDLASAGATKRPTCCVLVMTKPAKGELGQEEKEKLKSDYDQVVSEVNEITASLF* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2224 158 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 41 124 IPR004038 -
Aev01g2224 158 PANTHER OS06G0274200 PROTEIN 34 156 - -
Aev01g2224 158 PRINTS High mobility group-like nuclear protein signature 100 112 IPR002415 GO:0003723|GO:0005730
Aev01g2224 158 PRINTS High mobility group-like nuclear protein signature 56 66 IPR002415 GO:0003723|GO:0005730
Aev01g2224 158 PRINTS High mobility group-like nuclear protein signature 39 54 IPR002415 GO:0003723|GO:0005730
Aev01g2224 158 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 34 156 - -
Aev01g2224 158 SUPERFAMILY L30e-like 34 139 IPR029064 -
Aev01g2224 158 Gene3D - 33 153 IPR029064 -
Aev01g2224 158 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Aev01g2224 158 PRINTS Ribosomal protein L7A/RS6 family signature 98 112 IPR018492 -
Aev01g2224 158 PRINTS Ribosomal protein L7A/RS6 family signature 72 85 IPR018492 -
Aev01g2224 158 PRINTS Ribosomal protein L7A/RS6 family signature 88 98 IPR018492 -
Aev01g2224 158 PRINTS Ribosomal protein L7A/RS6 family signature 53 67 IPR018492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2224 Aev-Chr1 26520856 26522255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2224 53 125 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 31.507 9.02e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2224 K11129 - twl:119987297 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2224 01 26520856 26522255 Aev01g2224 01 26520856 26522255 ECH