Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2223 ATGGCACAAGATACTGTTTCTGGTGCTGATTCGCCTCGGCGACGTCATGGCCTACTACGGGATCAGGTTCAACTGGTTAAAAGAAAGGATTGTGATCGCTATGAAATTGTTTCAATCCAAGATTCATTGTCATTTGAGAAGGGGTTCTTCATAGTTATTCGTGCATGCCAATTGTTGGCTCAAAAGAATGATGGGATCATTTTAGTTGGAGTTGCAGGTCCCTCTGGAGCAGGGAAAACTGTTTTCACTGAGAAGGTCCACAATTTTATGCCAAGCTTAGCTGTCATCACAATGGACAATTATAACGATTCTAGTCGAATCATAGATGGCAACTTTGACGACCCTCGGTTGACGGATTATGATACCCTGCTCGAAAATATACGGGGTCTCAAAGCAGGGAAGCCAGTTGAGGTTCCAATATATGATTTCAAGTCTAGTTCTCGCATAGGGTACAGGACCGTTGAAGTCCCTAGCTCCCGCATTGTCATCATAGAAGGTATCTATGCCTTAAGTGAAAAATTACGACCTTTGCTTGATCTTCGTGTTTCAGTCACCGGTGGAGTTCACTTTGACCTTGTCAAGCGTGTTTTGCGGGACATCCAACGTGCTGGTCAGGAGCCTGAAGAAATCATTCATCAAATCTCTGAAACGGTATATCCTATGTATAAAGCTTTTATTGAACCAGATCTTCAAACTGCACATATAAAAATTATTAACAAGTTTAATCCATTCTCTGGATTCCAGAATCCCTCTTACATATTGAAGTCAACAAAAGCTGTGACAGTAGATCAAATCAAGGAAGTTATTGCTGCTGAGCATACTGAAACCAGAGAGGAAACATATGACATATATCTTCTACCCCCCGGGGAAGACCCTGAAGCATGTCAATCATACTTGAGAATGAGAAACCGGGACGGAAAGTACAATCTCATGTTTGAGGAGTGGGTTACAGACAGTCCATTCATAATATCACCCAGAATAACTTTTGAGGTCAGCGTGCGCCTTCTTGGAGGACTGATGGCATTGGGGTACACAATTGCAGCTATCCTGAAAAGAAGCAGTCATGTCTTCTATGATGATAAAGTGTCTGTAAAAACTGATTGGCTAGAACAACTTAATCGCATGTATGTCCAGGTGCAAGGAAAAGATAGAAACTATGTTAAACTTGTTGCAGAGAAACTGGGGTTGGATGGTTCGTATGTTCCTCGCACTTACATTGAACAAATTCAGCTAGAAAAGCTTGTTAATGATGTGATGGCACTGCCAGAGGATCTTAAGACAAAACTCAGCATTGATGATGATATGGTTTCAAGCCCTAAAGAAGCCCTTTCTAGAGCTTCTGCAGACAGGAGAATGAAACATCTGAATCGTGGTATTTCTCAGTCATATTCAAATCAGAGGGACAAACATCTATCTAAGTTGACGAGACTAGCTATAAATAACAGAAGATTCGATGGAAGAGCTCTAGAATCACCTGCATCAATCACTAACCAAGGAGTCATCACTCAGCTTTCCGATCAAATTTCCACATTAAATGAAAGGATGGATGAGTTCACCTCCCGTATCGAGGAACTGAATTCAAAGTTTGCTACCAGAAAAGCCAGTCAACAGAACATAGCTTTGCCGGCCGAAGCTTGCAACGGCTCAGGTCCAACTTCTCTCTTTGTATCTGGATTGAGCAATGGTTCATTGACCGGATCATTGCTTCCCCATTCTTCATCATCTTCCCAATTGGCTAGGGATTCTCCTCTGATGGAAGAGGTTTTACTTGTTGCAAGAGGGCAACGGCAAATCATACACCAACTAGACTCTCTGAGCAACCTGTTGCATGAATACAATGGAGAAAGGTCACGGCTAGAAAGAACAGACCACACAAGCAGAATGCGTGAAGTTGAATCTTTTGCTATCCCACTGGTCCTCACTTTGGCCGTTGGTGCTGTTGGTGTGTTTTTGTTCAAGGGTTTCACATCCCAAAAGTAG 1980 0.4247 MAQDTVSGADSPRRRHGLLRDQVQLVKRKDCDRYEIVSIQDSLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKVHNFMPSLAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIRGLKAGKPVEVPIYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPSYILKSTKAVTVDQIKEVIAAEHTETREETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFYDDKVSVKTDWLEQLNRMYVQVQGKDRNYVKLVAEKLGLDGSYVPRTYIEQIQLEKLVNDVMALPEDLKTKLSIDDDMVSSPKEALSRASADRRMKHLNRGISQSYSNQRDKHLSKLTRLAINNRRFDGRALESPASITNQGVITQLSDQISTLNERMDEFTSRIEELNSKFATRKASQQNIALPAEACNGSGPTSLFVSGLSNGSLTGSLLPHSSSSSQLARDSPLMEEVLLVARGQRQIIHQLDSLSNLLHEYNGERSRLERTDHTSRMREVESFAIPLVLTLAVGAVGVFLFKGFTSQK* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2223 659 PANTHER URIDINE KINASE 6 647 - -
Aev01g2223 659 PRINTS Uridine kinase signature 189 199 - -
Aev01g2223 659 PRINTS Uridine kinase signature 133 148 - -
Aev01g2223 659 PRINTS Uridine kinase signature 66 83 - -
Aev01g2223 659 PRINTS Uridine kinase signature 225 238 - -
Aev01g2223 659 Pfam Phosphoribulokinase / Uridine kinase family 69 237 IPR006083 GO:0005524|GO:0016301
Aev01g2223 659 ProSiteProfiles CYTH domain profile. 249 411 IPR023577 -
Aev01g2223 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 237 IPR027417 -
Aev01g2223 659 PANTHER URIDINE-CYTIDINE KINASE C-LIKE ISOFORM X1 6 647 - -
Aev01g2223 659 Coils Coil 602 622 - -
Aev01g2223 659 Pfam CYTH domain 273 405 IPR023577 -
Aev01g2223 659 Gene3D - 254 414 - -
Aev01g2223 659 Coils Coil 501 528 - -
Aev01g2223 659 SUPERFAMILY CYTH-like phosphatases 260 408 IPR033469 -
Aev01g2223 659 Gene3D - 67 246 IPR027417 -
Aev01g2223 659 CDD UMPK_like 68 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2223 Aev-Chr1 26515575 26520303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2223 67 237 PRT Gene Family AT5G40870 26.923 1.83e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2223 K00876 - gmx:100803122 1133.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2223 01 26515575 26520303 Aev01g2223 01 26515575 26520303 ECH
Aev03g0291 03 2219704 2230601 Aev01g2223 01 26515575 26520303 PCT