Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2217 ATGGCTGATGTGAGCTTCCTCCTTCGCCACCCAGAACAGGACGATGACCCTCACCTCCAAACCCTAACCCTCCTACCACTACCACCCCATTGGTCCCTTCCCGATTTAGATTTCTATGCCTCCGATCCCGAATTCCCCCTTCACCCCATCCACAACCACAATCTCCATTTCCCTGAACCCCGTTCTTCCTCCTCCCTCGTCCTCGACCGCGAGAACCAGGTCAATTTCGTCATGGATCTCTTCCAGCAGCGCGTCGAGCAGTCCCAGGTCATGGGCCACGATTTGGTCTCACACCCTCTCAACGACGTCGTTTTTGACGCCAATTGCGATTTCGGAACGGACATGGATGCATTCGGTCTCGATTTTGCGTTTTCCCTCGATGGTGGTTCCATGCACCGCTCTGCGCCTGGGGATTCCGTGCACCGCTCTGTCACCGGTGATGCTGCCGACGCTGATGGCGACGATTTCTTCTTCGGGAGGAGGGTTTCCGGATTTGATTCCGGCGAGGCGGCGTTCGAGAACTTAGTCCCCCTCGTGGGGTTCGGATCGGACTCCGAGGACGATGGGAACGACGGCGTTTTGGGGATCGGTGGTGTTCATTCCGACGAGGAATACAACGCACATGACGAGAACGACGACGTTTCGAGCTTCCCTCTGTACTGGGACGCGCTCCAATTGGAAGATAGCAGAGAAACCAACGAGGATTTCGAGTGGGAGGAAGTTGATGGAAGGATCGACGAGAGAGAGGTTCTGAGCATGCTCGCCGTCGAAGACGACAGGTCCGTTTCGGTCTCCGTTTCGCCAATCATGGGAGTCGTAGAAGCTGAGGATGAAGAAGTTAGCACTGTGAGGGTTGGTGGCATGGAGAATTTGGAGTGGGAAGTGTTGCTAAACGCCAACAATTTGGACACAGTCGTGATCCCCGATTTGAACCTCGATCCACAACCCTATTTCGGTGACCACGATGATTACATTTACACTGCGGAATATGAAATGATGTTTGGTCAATTCGGTGACAACGATAACCCCTTGATGGGTAGGCCTCCAGCTTCCGCTTCCATTGTTCGGAATTTGCCCTGTGTTGTTGTTACAAAGGATGATGTGGAAGGTAACAGTGCGGTTTGTGCTGTTTGCAAAGATGAGTTTGGTGTTGGGGAAGAAGCAAAGGTGTTGCCTTGCTCGCATCGTTACCATGGCGATTGCATTGTACCTTGGTTGGGGATTAGGAACACTTGCCCTGTTTGCCGATACGAGTTTCCGACTGATGATGCTGATTATGAGCGTAGGAGGGCACAGAGATCTGGCCACAGTGTTTGA 1317 0.5308 MADVSFLLRHPEQDDDPHLQTLTLLPLPPHWSLPDLDFYASDPEFPLHPIHNHNLHFPEPRSSSSLVLDRENQVNFVMDLFQQRVEQSQVMGHDLVSHPLNDVVFDANCDFGTDMDAFGLDFAFSLDGGSMHRSAPGDSVHRSVTGDAADADGDDFFFGRRVSGFDSGEAAFENLVPLVGFGSDSEDDGNDGVLGIGGVHSDEEYNAHDENDDVSSFPLYWDALQLEDSRETNEDFEWEEVDGRIDEREVLSMLAVEDDRSVSVSVSPIMGVVEAEDEEVSTVRVGGMENLEWEVLLNANNLDTVVIPDLNLDPQPYFGDHDDYIYTAEYEMMFGQFGDNDNPLMGRPPASASIVRNLPCVVVTKDDVEGNSAVCAVCKDEFGVGEEAKVLPCSHRYHGDCIVPWLGIRNTCPVCRYEFPTDDADYERRRAQRSGHSV* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2217 438 PANTHER - 64 434 - -
Aev01g2217 438 ProSiteProfiles Zinc finger RING-type profile. 375 416 IPR001841 -
Aev01g2217 438 SUPERFAMILY RING/U-box 357 422 - -
Aev01g2217 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 338 422 IPR013083 -
Aev01g2217 438 SMART ring_2 375 415 IPR001841 -
Aev01g2217 438 CDD RING-H2_RNF126_like 375 416 - -
Aev01g2217 438 Pfam Ring finger domain 375 416 IPR001841 -
Aev01g2217 438 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 64 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2217 Aev-Chr1 26476583 26477899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2217 24 422 C3H Transcription Factor Family AT5G60820 37.500 1.05e-58 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2217 - - adu:107469048 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2217 01 26476583 26477899 Aev01g2217 01 26476583 26477899 ECH