Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2216 ATGTCAAGCGGAAGCATCTTAGAGTTCTCCCCAAACAAACGCCTCAAAACCGAAGCGCCGATCGCCGACGCCGGCGATGACGACAGCCAGCCTGTTTGTTGCGGGATCTGCTACTCCGACCGCGGCGCTTCCATCGCCGGCGAGATCGATTGTTGCAACCACTACTTCTGCTTCGCGTGCATCATGGAGTGGGCGAAGCATGAGTCTCGTTGCCCTATCTGCCGCCAGAGATTCTCGAATGTTCGCAGGCCACCTAAGGAAGGCGTCTTATCTTTCTCTCGGGACATTAATGTTCCGATTCGTGACCAGGTTTATCATCCATATGGGAATATGACTACTGGTCCCACTATTACCTACGCCGAAGCCAAATGCAGCATCTGTCGTGGTGAGACAGATGCGAGTTTTCTTCTGCTTTGCGATCTTTGCGACACTGCTTCTCATACATACTGTGTTGGCCTGGGCTACACTGTCCCAGAAGGTGATTGGTTTTGTTATGACTGCGCTATTTCCCGGGAGACTACTGCAGAAGATGAAGAAGCAGAGCAAAAAAGTGTTGAGCCAAGTTCGAGAAGCTCACAAAACCAGTCACCTCTTCCTGCTATTCCTTCAGCAGATAGATTGAGTAGATACAGAGGGCAAAGGCCTCTGTCAAATGTCCAACCTGTGCAGCGTAACATACAGGCACTTCGTGATAACTGGAATGCTCTGAGAAGTGGTTCCATGAAGTTCCATTCTGGTAGTTCAGCTCAAACTGGCGGTAGCTTAGGTTGTCGTGGACGAAATTCTGGTTCAGTTTCACGTGACAAATCTGCTGAGCCGCGTTCTATGACTTCCTCGAGCAATCAACAGTCCAGTCACTCCAGTGTCCAAAGCGGCCATTCTAGAGGCACATCGAATGAGAGAGGCATGAAGGATATTGAGAAGGCTTGGAAAATGATGGACAAGGCAAAGAAGATGCAAGGGGATCGTCAAAGTACCGGCCGGAAGTAG 990 0.502 MSSGSILEFSPNKRLKTEAPIADAGDDDSQPVCCGICYSDRGASIAGEIDCCNHYFCFACIMEWAKHESRCPICRQRFSNVRRPPKEGVLSFSRDINVPIRDQVYHPYGNMTTGPTITYAEAKCSICRGETDASFLLLCDLCDTASHTYCVGLGYTVPEGDWFCYDCAISRETTAEDEEAEQKSVEPSSRSSQNQSPLPAIPSADRLSRYRGQRPLSNVQPVQRNIQALRDNWNALRSGSMKFHSGSSAQTGGSLGCRGRNSGSVSRDKSAEPRSMTSSSNQQSSHSSVQSGHSRGTSNERGMKDIEKAWKMMDKAKKMQGDRQSTGRK* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2216 329 MobiDBLite consensus disorder prediction 175 205 - -
Aev01g2216 329 MobiDBLite consensus disorder prediction 240 329 - -
Aev01g2216 329 MobiDBLite consensus disorder prediction 240 297 - -
Aev01g2216 329 ProSiteProfiles Zinc finger PHD-type profile. 121 170 IPR019787 -
Aev01g2216 329 PANTHER PHD-FINGER FAMILY PROTEIN 204 322 - -
Aev01g2216 329 PANTHER PHD-FINGER FAMILY PROTEIN 10 188 - -
Aev01g2216 329 SMART PHD_3 123 168 IPR001965 -
Aev01g2216 329 ProSiteProfiles Zinc finger RING-type profile. 34 75 IPR001841 -
Aev01g2216 329 SMART ring_2 124 167 IPR001841 -
Aev01g2216 329 SMART ring_2 34 74 IPR001841 -
Aev01g2216 329 Coils Coil 329 329 - -
Aev01g2216 329 Pfam PHD-finger 124 168 IPR019787 -
Aev01g2216 329 SUPERFAMILY RING/U-box 28 85 - -
Aev01g2216 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 84 IPR013083 -
Aev01g2216 329 MobiDBLite consensus disorder prediction 298 329 - -
Aev01g2216 329 Pfam Ring finger domain 34 75 IPR001841 -
Aev01g2216 329 SUPERFAMILY FYVE/PHD zinc finger 117 172 IPR011011 -
Aev01g2216 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 183 IPR013083 -
Aev01g2216 329 MobiDBLite consensus disorder prediction 186 201 - -
Aev01g2216 329 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Aev01g2216 329 PANTHER HISTONE ACETYLTRANSFERASE 204 322 - -
Aev01g2216 329 PANTHER HISTONE ACETYLTRANSFERASE 10 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2216 Aev-Chr1 26466835 26468345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2216 92 180 C2H2 Transcription Factor Family AT3G01460 30.000 1.94e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev01g2216 PHD 7e-10 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2216 - - adu:107469006 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2216 01 26466835 26468345 Aev01g2216 01 26466835 26468345 ECH