Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2215 ATGATGGAGCTTCCTCAAGCGCGTCCTTTCGGAACCGAAGGAAGAAAACCTACGCATGACTTTCTGTCACTCTACAGTAATTCAACTGCCCAACAAGATCCAAGGCCATCTTCTCAAGGAAGCTACCTCAAGACCCATGATTTCTTGAGGGTAGAAACGAAAGCCAGCGCAAAGGAAGAAGCCACAGATGAAATATCATCAGCAGTTCAAAAGTTACCGCCTCCGGCACCACCACCTCCTTCCTCTGTTGAGCACCTCTTACCTGGAGGAATTGGGACTTACAGTATAAGCCACATTTCTTATTTTAATAATAATAATAATCAAAGGGTTCCGAAACCAGAGGCATCGCTTTTCTCTGGGCGTCAAGCAACCAGCACGGACAGAAATGATGACAACTCCAACTGCAGTTCTTACACTTCAAGTGGTTTCACTTTGTGGGAAGAGTCTGCAGTTAACAAGGGAAAGACAGGGAAGGAGAATAATGTGAGCGAGAAGCCTACAGGTCTAGGAGAGACAGAGTCTGCAAAGCAAGGGCAGTGGACGTTGACGGAGCGAACCTCACAGTCATTTTCTAACCATCGTCCTAACAGCTTCAACTCTCGCTCTTCCTCTCAGACAACTGGGCATAAGAACCAGAGTTTTATGGAAATGATGAAGTCCGCAAAGGATTGTGCCCAGGATGAAGAGTTAGAAAACGAAGAAACATTTTTTCTCAAGAAAGAATCCTCCAACACCCAAGGAGCAGAGTTGAGGGTGAAAGTGGATGGGAAGAGTACTGATCAAAAGCCAAACACACCAAGATCAAAACATTCTGCAACAGAGCAGCGGAGAAGGAGCAAAATTAATGACAGATTCCAGATGCTAAGAGAGCTCATTCCACACAGTGACCAAAAGAGAGACAAAGCGTCGTTTTTGTTAGAGGTCATTGAGTATATTCATTTTTTACAAGAGAAGGTGCACAAGTATGAAGGCTCATTCCAAGGGTGGAATCACGAACCAGAAAAAATAATGCCTTGGAAAAACAATGACAGGCCAGCAGAAAGTTTAGAACCTCGCGGCACAAATAGTGGCGGGTCAGGTCCATCTCCACCATTGCTGTTTGCTTCAAAGATTGAAGAGAAAAATACCAGCATCTCCCCAACAATTCCTGGGAACACACCAACTACCACATTTAAGACGATGGATCATCATCCTGGAATAACACCGAACAAGGCTGGTTTTCCAATTCCTATTTCCCCACAGCCAAATTTCTTCACCCCTACCCAAAGCAGTGGTCCTGGAGGAGTGTCTCAGGTTGCACACAGAGTGGCATCTGATGCAGAGAATGGCAGATATCAACCCTCAGTGGAATCTGCAGCTACTAGCAGTGAAAAGCTGAAAGAGAAAGAGCTCACTATTGAAGGTGGTGCCATTAGCATATCAAGTGTGTACTCAAAAGGGTTGTTGGATACACTTACACATGCACTGCAGAGTTCAGGAGTGGATTTGACACAGGCTAGCATCTCAGTGCAAATTGCACTTGGTAAGCAATCAAACATCAGACCAACCGTGCCAATACCAATGCCAATGTGTGGCCTTAAGGATGATGAAGTTCCTTCCAACAATCAAAGGTTGGTTCGCTCTAGAGTTGCCACCTCTGATAAGTCTGACCAAGCAGTAAAGAAGATAAAGACGTGCAGAAGCTAA 1686 0.4508 MMELPQARPFGTEGRKPTHDFLSLYSNSTAQQDPRPSSQGSYLKTHDFLRVETKASAKEEATDEISSAVQKLPPPAPPPPSSVEHLLPGGIGTYSISHISYFNNNNNQRVPKPEASLFSGRQATSTDRNDDNSNCSSYTSSGFTLWEESAVNKGKTGKENNVSEKPTGLGETESAKQGQWTLTERTSQSFSNHRPNSFNSRSSSQTTGHKNQSFMEMMKSAKDCAQDEELENEETFFLKKESSNTQGAELRVKVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWNHEPEKIMPWKNNDRPAESLEPRGTNSGGSGPSPPLLFASKIEEKNTSISPTIPGNTPTTTFKTMDHHPGITPNKAGFPIPISPQPNFFTPTQSSGPGGVSQVAHRVASDAENGRYQPSVESAATSSEKLKEKELTIEGGAISISSVYSKGLLDTLTHALQSSGVDLTQASISVQIALGKQSNIRPTVPIPMPMCGLKDDEVPSNNQRLVRSRVATSDKSDQAVKKIKTCRS* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2215 561 MobiDBLite consensus disorder prediction 105 210 - -
Aev01g2215 561 MobiDBLite consensus disorder prediction 47 65 - -
Aev01g2215 561 MobiDBLite consensus disorder prediction 253 281 - -
Aev01g2215 561 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
Aev01g2215 561 MobiDBLite consensus disorder prediction 161 210 - -
Aev01g2215 561 MobiDBLite consensus disorder prediction 539 561 - -
Aev01g2215 561 PANTHER TRANSCRIPTION FACTOR BIM1 2 558 - -
Aev01g2215 561 MobiDBLite consensus disorder prediction 105 147 - -
Aev01g2215 561 Pfam Helix-loop-helix DNA-binding domain 267 316 IPR011598 GO:0046983
Aev01g2215 561 Gene3D - 262 336 IPR036638 GO:0046983
Aev01g2215 561 MobiDBLite consensus disorder prediction 1 83 - -
Aev01g2215 561 MobiDBLite consensus disorder prediction 21 44 - -
Aev01g2215 561 MobiDBLite consensus disorder prediction 348 362 - -
Aev01g2215 561 CDD bHLH_AtBIM_like 264 339 - -
Aev01g2215 561 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 2 558 IPR044295 GO:0003700|GO:0006351|GO:0046983
Aev01g2215 561 MobiDBLite consensus disorder prediction 237 281 - -
Aev01g2215 561 MobiDBLite consensus disorder prediction 543 561 - -
Aev01g2215 561 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 334 IPR036638 GO:0046983
Aev01g2215 561 SMART finulus 271 321 IPR011598 GO:0046983
Aev01g2215 561 MobiDBLite consensus disorder prediction 336 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2215 Aev-Chr1 26445104 26453558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2215 2 511 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 50.566 2.24e-130 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev01g2215 HLH 4.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2215 - - adu:107468970 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2215 01 26445104 26453558 Aev01g2215 01 26445104 26453558 ECH