Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2199 ATGGAGTCCCTAGCCACTGGATCTGTTTTCCACCGTGGTGGCTTTTTGGTAACTTCACTTCTGTTACTCTTCTCTTGCACCACATTCACTTCTACAGAAGCCTATGATGCACTTGATCCAACTGGAAACATAACAATCAAATGGGATGTCATAAGCTGGACCGGTGACGGCTATGTTGCTGTGGTTACAATGTACAACTTTCAACAGTATAGGCATATTCAGGCTCCTGGATGGACATTAGGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAGCATGATGGGAGGCCAAACCACAGAGCAAGGAGACTGCTCAAAGTTCAAAGGGAACATTCCACATTGCTGTAAGAAGGACCCAACAGTAGTTGATTTACTTCCAGGCACTCCTTACAACCAGCAGATTGCAAATTGTTGCAAAGGGGGCGTCTTAAACTCGTGGGCACAGGACCCTGACACCGCACTAAGTTCGTTTCAAGTTAGTGTCGGTATGGCCGGAACAACTAACAAAACGGTTAAATTGCCGAGAAATTTTACCCTGAAGGCACCAGGGCCTGGTTATACTTGTGGCCCTGCAAAGATTGTGAGACCTACAAAATTTATTACCAATGACAAGAGGAGAACCACTCAGGCCTTGATGACCTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAAAAGACCCCAACATGTTGTGTTTCTCTTTCGTCCTTCTACAATAACACAATAGTAAACTGTCCGACGTGCACCTGTGGCTGTCAAAACAAAACACAACCTGGCAGCTGCGTCAATCGAGACTCTCCACATCTAGCATCAGTTGTATCGCCACCGGGCAAAGCTTTAAATACACCTCTAGTTCAGTGTACAAGCCATATGTGTCCTATTCGGGTGCATTGGCATGTGAAGCTCCAATACAAAGAGTACTGGAGGGTCAAGATCACTGTCACAAATTTCAATTACAGAATGAACTATTCACAATGGAACCTTGTTGTGCAGCATCCAAATTTTGACAATGTAACCCAGCTTTTCAGCTTCAATTACAAGCCACTAACACCTTATGAGGGCATAAATGATACTGGCATGCTGTGGGGAGTCAAATTCTACAATGATTTTCTTAATTCAGCTGGACCACTTGGGAATGTGCAGTCAGAGCTTTTGTTTAGAAAGGACAAATCAACCTTCACATTTGAGAAAGGATGGGCATTTCCACGAAGAATATATTTCAATGGAGATAACTGTGTGATGCCGCCTCCGGACGCCTATCCATGGCTACCAAATGCAAGTTCAAAACTAGTGTTCTCCTCTTCACTAAGTTCTGTCATAGGTGAAGGAAGGAAACATCATAGAAGCAATGGAATGTGA 1362 0.4405 MESLATGSVFHRGGFLVTSLLLLFSCTTFTSTEAYDALDPTGNITIKWDVISWTGDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPDTALSSFQVSVGMAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVRPTKFITNDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCTCGCQNKTQPGSCVNRDSPHLASVVSPPGKALNTPLVQCTSHMCPIRVHWHVKLQYKEYWRVKITVTNFNYRMNYSQWNLVVQHPNFDNVTQLFSFNYKPLTPYEGINDTGMLWGVKFYNDFLNSAGPLGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSSSLSSVIGEGRKHHRSNGM* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2199 453 Pfam COBRA-like protein 58 221 IPR006918 GO:0010215|GO:0031225
Aev01g2199 453 PANTHER COBRA-LIKE PROTEIN 14 435 - -
Aev01g2199 453 PANTHER PROTEIN COBRA 14 435 IPR006918 GO:0010215|GO:0031225
Aev01g2199 453 PIRSF COBRA 7 443 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2199 Aev-Chr1 26325840 26328497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2199 5 440 COBRA Gene Family AT3G02210 75.286 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2199 - - gmx:100811581 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2199 01 26325840 26328497 Aev01g2199 01 26325840 26328497 ECH
Aev01g2199 01 26325840 26328497 Aev08g1682 08 13324976 13328554 PCT