Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2196 ATGCGCGGCTTAAGAAGTGAAAGAGCTCCTCTGTTAGAGGCTGAGCGCGGCGGCGAAAGGGGAAAGAGTAATGATGCCTCGGCAGAACATGTCTCCGACCTTGAGCATGGCGATGCTGTGCCGGCTGCCAATGTCGGATTCTTCAGAGTATTTTCACTTGCAAAACCTGAGGCTGGAAAGTTGGTTATTGGCACAGTGGCTTTGTTGATTGCAGCCACATCAAGTATCTTAGTTCAAAAATATGGTGGGAAGATAATTGACATTGTCTCAAGGGATCTCCGAACTCCTGAAGAGAAAGATAGAGCTTTGGATGCTGTCAAGAGCACCATAGTAGAAATCTTTCTGATTGTTGTTATTGGTTCAGTTTGCACAGCACTACGAGCTTGGCTTTTTTCTTCTGCGAGTGAAAGAGTTGTGGCGCGACTGAGAAAGGATCTGTTCAGCCACCTTGTAAGCCAGGAGATTGCCTTCTTCGATGTTACTCGTACTGGGGAACTTCTAAGTAGGCTGTCTGAAGATACACAGATCATAAAGAATGCTGCAACTACCAATCTTTCTGAAGCACTCAGAAACTTATCAACTGCACTTATTGGTCTCAGCTTCATGTTTGCAACATCATGGAAGTTAACATTGTTGGCTTTGTGCGTTGTGCCTGTTATTTCTGTTGCTGTTCGTAAATTTGGGCGTTTCTTGCGTGAACTCTCCCATAAAACTCAAGCTGCAGCTGCAGTAGCATCTTCAATTGCCGAGGAATCCTTCGGTGCTGTAAGAACAGTAAGATCTTTTGCCCAAGAAGATTATGAAATAACGCGCTACTCAGAGAAAGTTGAGGAGACACTCAAGCTTGGACTTAAGCAAGCTAAAGTTGTTGGACTCTTTTCTGGAGGCCTTAATGCAGCTTCAACGCTATCAGTTATTGTAGTAGTTATATATGGAGCTAATTTGACAATCAAGGGTTCTATGTCCTCCGGTGATCTTACGTCTTTCATTCTTTATAGTCTCTCAGTGGGATCTTCTATATCTGGTCTGTCAGGATTGTATACAGTGGTTATGAAAGCTGCTGGTGCTAGCAGAAGGGTATTTCAACTTCTAGATCGTGCCTCATCGATGCCTAAGCCAGGAGATAAATGTCCTCTTGGAGATCAAGATGGGGAAGTGGAACTTGATGATGTATGGTTTGCTTATCCATCGCGCCCGAGTCATATGGTGCTGAAGGGCATTACATTGAAGCTTCTTCCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGACAACAATAGCGAACTTAATTGAGAGATTTTATGACCCAACCAAGGGAAAGATTCTGGTGAATGGAGTCCCTCTTGTAGAAATATCACACAAGCATTTACACAGAAAGATCAGTATAGTGAGTCAGGAGCCTACACTCTTCAACTGTTCCATTGAGGAGAACATAGCCTACGGTTTTGACGGCAAAGTCGATGAAGTTGATATAGAAAGCGCAGCTAAAATGGCCAATGCACACGAGTTTATATCAAAGTTCCCAGAAAAATACAAGACCTTTGTCGGAGAACGCGGTGTAAGGCTTTCAGGAGGGCAGAAACAGAGAATAGCAATTGCCAGAGCCCTACTTATGGACCCCAAAATTCTCCTCCTGGATGAAGCCACAAGTGCCCTAGATGCCGAAAGCGAATACCTAGTGCAGGATGCAATGGATTCTCTCATGAAGGGAAGGACAGTTCTAGTTATTGCTCATAGGTTATCGACTGTTAAAACTGCTGATACAGTTGCAGTTGTTTCCGACGGCCAAGTAGTCGAGAGTGGCACTCACGACGAGCTTCTTAGCAAGAATGGCGTCTACACTTCTTTAGTCAGGAGACAACTACAAACATCGACAAAAGCCGAAATCTAG 1902 0.4443 MRGLRSERAPLLEAERGGERGKSNDASAEHVSDLEHGDAVPAANVGFFRVFSLAKPEAGKLVIGTVALLIAATSSILVQKYGGKIIDIVSRDLRTPEEKDRALDAVKSTIVEIFLIVVIGSVCTALRAWLFSSASERVVARLRKDLFSHLVSQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTALIGLSFMFATSWKLTLLALCVVPVISVAVRKFGRFLRELSHKTQAAAAVASSIAEESFGAVRTVRSFAQEDYEITRYSEKVEETLKLGLKQAKVVGLFSGGLNAASTLSVIVVVIYGANLTIKGSMSSGDLTSFILYSLSVGSSISGLSGLYTVVMKAAGASRRVFQLLDRASSMPKPGDKCPLGDQDGEVELDDVWFAYPSRPSHMVLKGITLKLLPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILVNGVPLVEISHKHLHRKISIVSQEPTLFNCSIEENIAYGFDGKVDEVDIESAAKMANAHEFISKFPEKYKTFVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKTADTVAVVSDGQVVESGTHDELLSKNGVYTSLVRRQLQTSTKAEI* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2196 633 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 3 628 IPR039421 -
Aev01g2196 633 SUPERFAMILY ABC transporter transmembrane region 49 366 IPR036640 GO:0005524|GO:0016021
Aev01g2196 633 Pfam ABC transporter transmembrane region 61 334 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev01g2196 633 Pfam ABC transporter 404 554 IPR003439 GO:0005524
Aev01g2196 633 Gene3D - 384 629 IPR027417 -
Aev01g2196 633 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524
Aev01g2196 633 SMART AAA_5 413 607 IPR003593 -
Aev01g2196 633 CDD ABC_MTABC3_MDL1_MDL2 386 624 - -
Aev01g2196 633 CDD ABC_6TM_AtABCB27_like 64 360 - -
Aev01g2196 633 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 386 623 IPR003439 GO:0005524
Aev01g2196 633 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 62 352 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev01g2196 633 MobiDBLite consensus disorder prediction 1 31 - -
Aev01g2196 633 Gene3D ABC transporter type 1, transmembrane domain 113 383 IPR036640 GO:0005524|GO:0016021
Aev01g2196 633 PIRSF ABC_prm/ATPase_B 9 633 - -
Aev01g2196 633 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 3 628 - -
Aev01g2196 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 624 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2196 Aev-Chr1 26291975 26296523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2196 47 630 Calmodulin-binding Proteins AT2G36910 34.732 5.71e-97 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2196 - - var:108320153 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2196 01 26291975 26296523 Aev01g2196 01 26291975 26296523 ECH