Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2192 ATGATGATTGAAAGTTCATCTTCAGGTAAAGGTTATTATTATCATCAGGCCACAAAGCAAGAGGGAGATGATGATAATAATAATCCTATTGAGAAATTTAATAAGGCATTGCCCTCAACTTCTTCTTCTTCTTCAAGACAATGGACAGCATTGAGGAACCCAAGGATTGTGAGAGTGTCACGCACTATGGGAGGAAAAGATAGGCATAGCAAAGTTTGCACCATTAGGGGACTAAGGGATAGAAGGATAAGGCTTTCAGTTCCCACAGCAATTCAATTATATGATCTCCAAGATAGGCTTGGCCTAACCCAACCTAGCAAGGTCATTGATTGGTTACTTGATGCCACCAAAATTGACATTGACAACCTCCCTCCCCTTCAAATCCCTCATGGTTGTTTCCCTCAATTTCACCACCAACAACAACAACAGCATGCCCTACTCCCCGGCAACCATCACGAGCTGCCGAGTGCCCTCCATCATCAATTCTCCCTCGCAGGAGGATTCTATGATGGAGGAAACTCGAACCAGATTAATCTCTTAGCAAGGTCGTCAAGGTTTTGGGACATGGATTTGGTAGCTAGGTTGAAGGGTAAGGAAGAAGGTGATGATGATCAAGGTTTGTCTATATCCGAAAAGGGGAAGTGGATCAAAAGAAATGAAGAAGAAAATCAAGATGGAGTTGGATTGGCTCAGAAGCTTTTCCCCATTGGGAGTGATAATAATAACAACAACAACTCTTCTTTATCTAGTTTGCTTAACATTAATGCCATGACCTATAACAACTCCTACCATAATAATTTAGATCCTTCAAATCTAACTCTATCCCAATTTGGAAGCCATGGATTGTTGTTTCCATCACAACAATTAGATCCTCCTCAATCTCATCATCATAGTAGTGGTTTACAATTTTCATCTTCTATCCCATCCGGTTCACAATTACCTTTTTGCCCTTCTTCAGCTCCTACACCATCACCACCACTTTTCACTAGTACTACTCCTTATGCTCCATTTCTTATGTCTTCATCTATGGAAAGTGATCCAAGGCAATTCAACCATACTCAGCTTCTGAACTCGAGTTCTCACATCATGCCTCAGTCTCTGATTCCACCGTCCATTCATTCGATCAATTCGCCCCTTAGACGCCTTCCGATGCCGTTTAGTTCCAAGCTTCTTGATTCGGATATCAACCAGCGTAGTAGCCAACAAGATCATGATGATAAAGGGTATCTATCGGAGCGATTTCGGTGA 1248 0.4191 MMIESSSSGKGYYYHQATKQEGDDDNNNPIEKFNKALPSTSSSSSRQWTALRNPRIVRVSRTMGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLTQPSKVIDWLLDATKIDIDNLPPLQIPHGCFPQFHHQQQQQHALLPGNHHELPSALHHQFSLAGGFYDGGNSNQINLLARSSRFWDMDLVARLKGKEEGDDDQGLSISEKGKWIKRNEEENQDGVGLAQKLFPIGSDNNNNNNSSLSSLLNINAMTYNNSYHNNLDPSNLTLSQFGSHGLLFPSQQLDPPQSHHHSSGLQFSSSIPSGSQLPFCPSSAPTPSPPLFTSTTPYAPFLMSSSMESDPRQFNHTQLLNSSSHIMPQSLIPPSIHSINSPLRRLPMPFSSKLLDSDINQRSSQQDHDDKGYLSERFR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2192 415 Pfam TCP family transcription factor 65 129 IPR017887 -
Aev01g2192 415 MobiDBLite consensus disorder prediction 32 48 - -
Aev01g2192 415 MobiDBLite consensus disorder prediction 394 415 - -
Aev01g2192 415 ProSiteProfiles TCP domain profile. 65 123 IPR017887 -
Aev01g2192 415 MobiDBLite consensus disorder prediction 398 415 - -
Aev01g2192 415 MobiDBLite consensus disorder prediction 1 48 - -
Aev01g2192 415 PANTHER TRANSCRIPTION FACTOR TCP17 15 405 - -
Aev01g2192 415 MobiDBLite consensus disorder prediction 283 317 - -
Aev01g2192 415 MobiDBLite consensus disorder prediction 283 328 - -
Aev01g2192 415 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 405 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2192 Aev-Chr1 26254342 26259809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2192 48 382 TCP Transcription Factor Family AT5G60970 39.943 1.38e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev01g2192 TCP 3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2192 - - gmx:100788984 319.701