Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2186 ATGAACCACCACCACCACGAGGACAAAGTAACCATGGACCTTGTTCCACCCTCTGAGCACCTCTGCTACGTTCGTTGCAACTTTTGCAACACTGTTCTTGCGGTTGGGATCCCATGCAAGAGGCTGTTAGATACAGTGACAGTGAAGTGTGGTCACTGCAGCAACCTCTCCTTTCTCAGCACCAGATCCCCATTTTCCCAAAATCAAATCACTGCTGATCACACAACTCTCAGTCTCCAGGGATTTTACAGTGATACCAAAAAGGGGCAAGCATCATCTTCATCTTCCTCACCAACAACTTCTACTGAGTCTGTGTCCCCTAAAGCAGCTCCGTTTGTTGTAAAACCACCTGAGAAGAAGCACCGTCTCCCATCAGCTTACAACCGTTTCATGAAGAATGAAAGAGCTGTGGCAAATGGTGGTGATGATAATGGTAGAGAAATGGAGCAAGTTAATTTGGAGCCAGTTTAA 471 0.465 MNHHHHEDKVTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRSPFSQNQITADHTTLSLQGFYSDTKKGQASSSSSSPTTSTESVSPKAAPFVVKPPEKKHRLPSAYNRFMKNERAVANGGDDNGREMEQVNLEPV* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2186 156 MobiDBLite consensus disorder prediction 114 128 - -
Aev01g2186 156 PANTHER PROTEIN CRABS CLAW 10 134 - -
Aev01g2186 156 MobiDBLite consensus disorder prediction 85 156 - -
Aev01g2186 156 PANTHER PROTEIN YABBY 6-RELATED 10 134 IPR006780 GO:0007275
Aev01g2186 156 MobiDBLite consensus disorder prediction 85 107 - -
Aev01g2186 156 Pfam YABBY protein 17 134 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2186 Aev-Chr1 26164101 26168072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2186 7 134 C2C2-YABBY Transcription Factor Family AT1G69180 59.091 4.20e-38 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aev01g2186 YABBY 1.8e-35 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2186 K25796 - gmx:100795791 232.646