Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2174 ATGGCGTCGTCGTCGGCGAAGCGATGCCACTACGAGGTACTTGGCCTCCCCCGTGACTGCACCCCCGACGAGATCCGATCCGCGTACCGCCGCCTCGCCCTGCAGCGCCACCCTGACAAGCTCGTCCAATCCGGAATCTCCCAATCCGAAGCTACCGCCCAGTTCCAAGAGCTTCAACACGCCTACGAGGTCCTCTCCGACCCAAAAGAACGCTCCTGGTACGACTCACACCGATCCCAAATCCTCTTCTCCGATCCTAACTCCCTCCGCAACTCCTCAATCCCCGACCTGTTCTCCTTCTTCTCCAACACCGTATTCTCCGGATACTCCGATTCCGGCAGAGGCTTCTACAAAGTGTATTCCGAAGTGTTCGACAAGATTCACGCCAATGAGCTCAATTTCGCGAAGAAGTTAGGGTTAGGGATTGATTCAGTTAGGCAAGCTCCTGTTATGGGGAATTTGGAGAGCCCTTATGAGCAGGTTAGTGCTTTTTATGGTTACTGGTTAGGGTTTTCGACGGTTATGGATTTTTGCTGGGTTGATGAGTACGATGCTGCGGCGGGGCCGAACCGGAGGGCGAGGAGGTTGATGGAGGAGGAGAACAACAAGTTGAGGAAGAAGGCGAAGAGGGAGTACAATGATACTGTGAGGAAGTTGGCTGATTTTGTGAAGAAGAGGGATAAGAGAGTGATTGATATGAAGGTGAAGAAGGAAAAGGAGGAGGAGAAGAGGAAGGAGGAGGAGAGGGAGAGGAAGAAGAGGTTGGAGAAGGAGAAGAAGGAGAGGGCTATGGCGTATGAGGAGCCAGATTGGGCTAAGATTGATGAGGATGATGGTGATGAGGAGGGTGGTGGTGGTGGTGATGATGAGTTTTGGTTTGAAGAGGATGAAGGGAAGAAGGGTGGTGGTGGTGGTGAGAAGGAGTTTTATTGTGTGTTGTGTGGGAAGAAGTTCAAGAGTGAGATGCAGTGGAAGAACCATGAGCAGTCCAAGAAGCATAAGGAGAAGGTTGCCGAGTTCAAGGATTCAATTGCAGATGAGGAGGAGGAGGAGGAGGATATCGATGAGGATTTGGAGGTGGAAGGAGGAAGAGAGGAGGGGTTGGAAAGTGAGGAGGATGGAGTTCAGGCTAGTGATGATCGGTCGGGGGAGATGGTCTTTGATGAAGATGATGATGAAAATGGTGTTCTTGAAGCAATGGTGGCTGGGCACATGAACAGAAAACCTCGCACTTCAAAGCACAAGCCCAAAGCTTCAGTGGCTCTAACTCAAGTTGAGAATGAGGATGATGGGTTTGGCCCTATGGAATATGACAACAGAAAGAACACAAGAAAGAAACGTGGTGCCAAGAAAGAGAAGGGTAGGAAAAATTGGGAAGAATCTAATGTGGCTACTGTCAATGGGGACGAAGAGAATAATGACAACAATGGGAATGATAATTCTTATGCAGAGGAGTCTTCTTCTCAATGTTTTGTGGAAAATGAGAATAATGGTAAAGAGTTAGAGAATGAGCATGTTGGTAGAGATAAGAAGACTACAAGTAAACCGGTTGACAAAAAAGGAGCTGCAAGGGACACAAAAAACAAAGCCAAAACTTCATCCAAAGGAAGAAAATCAAAGATGACATCAAAGCATCTCGGCAATACTTGTGAGACTTGTGGAGAGGAGTTTGATTCAAGGAACAAATTACATAAACATCTGGGCGATTCTGGGCATGCATCGTTAAAAAGTAGATAA 1737 0.4807 MASSSAKRCHYEVLGLPRDCTPDEIRSAYRRLALQRHPDKLVQSGISQSEATAQFQELQHAYEVLSDPKERSWYDSHRSQILFSDPNSLRNSSIPDLFSFFSNTVFSGYSDSGRGFYKVYSEVFDKIHANELNFAKKLGLGIDSVRQAPVMGNLESPYEQVSAFYGYWLGFSTVMDFCWVDEYDAAAGPNRRARRLMEEENNKLRKKAKREYNDTVRKLADFVKKRDKRVIDMKVKKEKEEEKRKEEERERKKRLEKEKKERAMAYEEPDWAKIDEDDGDEEGGGGGDDEFWFEEDEGKKGGGGGEKEFYCVLCGKKFKSEMQWKNHEQSKKHKEKVAEFKDSIADEEEEEEDIDEDLEVEGGREEGLESEEDGVQASDDRSGEMVFDEDDDENGVLEAMVAGHMNRKPRTSKHKPKASVALTQVENEDDGFGPMEYDNRKNTRKKRGAKKEKGRKNWEESNVATVNGDEENNDNNGNDNSYAEESSSQCFVENENNGKELENEHVGRDKKTTSKPVDKKGAARDTKNKAKTSSKGRKSKMTSKHLGNTCETCGEEFDSRNKLHKHLGDSGHASLKSR* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2174 578 MobiDBLite consensus disorder prediction 497 532 - -
Aev01g2174 578 PRINTS DnaJ domain signature 50 70 IPR001623 -
Aev01g2174 578 PRINTS DnaJ domain signature 29 44 IPR001623 -
Aev01g2174 578 PRINTS DnaJ domain signature 11 29 IPR001623 -
Aev01g2174 578 SUPERFAMILY Chaperone J-domain 5 109 IPR036869 -
Aev01g2174 578 MobiDBLite consensus disorder prediction 323 557 - -
Aev01g2174 578 CDD DnaJ 9 67 IPR001623 -
Aev01g2174 578 MobiDBLite consensus disorder prediction 271 292 - -
Aev01g2174 578 ProSiteProfiles Zinc finger C2H2 type domain profile. 548 577 IPR013087 -
Aev01g2174 578 MobiDBLite consensus disorder prediction 344 368 - -
Aev01g2174 578 ProSiteProfiles dnaJ domain profile. 9 78 IPR001623 -
Aev01g2174 578 ProSiteProfiles Zinc finger C2H2 type domain profile. 309 338 IPR013087 -
Aev01g2174 578 ProSitePatterns Zinc finger C2H2 type domain signature. 311 333 IPR013087 -
Aev01g2174 578 MobiDBLite consensus disorder prediction 460 496 - -
Aev01g2174 578 Gene3D DnaJ domain 1 90 IPR036869 -
Aev01g2174 578 Gene3D Classic Zinc Finger 294 355 - -
Aev01g2174 578 ProSitePatterns Nt-dnaJ domain signature. 55 74 IPR018253 -
Aev01g2174 578 MobiDBLite consensus disorder prediction 236 306 - -
Aev01g2174 578 Coils Coil 330 357 - -
Aev01g2174 578 SMART c2h2final6 309 333 IPR013087 -
Aev01g2174 578 SMART c2h2final6 548 572 IPR013087 -
Aev01g2174 578 Pfam DnaJ domain 10 75 IPR001623 -
Aev01g2174 578 Coils Coil 230 265 - -
Aev01g2174 578 Pfam Zinc-finger double-stranded RNA-binding 309 334 IPR022755 -
Aev01g2174 578 SMART dnaj_3 8 70 IPR001623 -
Aev01g2174 578 ProSitePatterns Zinc finger C2H2 type domain signature. 550 572 IPR013087 -
Aev01g2174 578 MobiDBLite consensus disorder prediction 236 270 - -
Aev01g2174 578 MobiDBLite consensus disorder prediction 369 383 - -
Aev01g2174 578 Coils Coil 190 214 - -
Aev01g2174 578 SMART ZnF_U1_5 306 340 IPR003604 GO:0003676|GO:0008270
Aev01g2174 578 MobiDBLite consensus disorder prediction 323 343 - -
Aev01g2174 578 SUPERFAMILY beta-beta-alpha zinc fingers 303 352 IPR036236 -
Aev01g2174 578 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 3 578 IPR044648 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2174 Aev-Chr1 26026466 26028889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2174 1 578 C2H2 Transcription Factor Family AT1G74250 49.689 2.20e-179 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev01g2174 DnaJ 5.9e-22 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2174 K09506 - gmx:100788305 751.125