Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2171 ATGCCCGCCCCCACTCAACAAGAACCAAATAGCTCCAACAACAAGAAGAAACAATGCACAAGCACCAATTGCAATAATATTAGTAGTAGTAGTGACAATGAAGAAGGGCCGATGATGATTATGAATAATAATAATAAGAAGTACCGTGGGGTGAGGCGCAGGCAGTGGGGTCGTTACGCGGCGGAGATAAGAGACCCTCTGGCGAGGAAGCAAAGGTGGCTCGGCACCTTCTCCACGCCAGAGGAAGCCGCACGAGCGTACGATGCCGCCGCCCGCGCCATCCGTGGTCACAGAGCCCGCACCAACTTCCCTTACCCTCATGATTTTTACTACTCTCCTCACCATCACCAAACAAACTCATCATCTCCTTCTTCGTTGGACATGATGCTTCTTCGCTTCCTTATGGATTTCATCAACACTTGTGACAACCCTGCTTTGGTTTCTTCAGCTCAGCATTTTTACAAACAGTTGTTGAGCAAAGAAACTTGTTCTTCTTCTTTTGCTTCCTCTTTTTCTACCTGTGGTATTGCTGTCCCTGAAGAAGAAGAAGAAGACAAAATTCATCATGATGATGTTCCTACTACTGCTATGACTAATGTGATGTGCAATAATAATCCAGAGTGGTTTCCTACTACTACTAATAATAATAACATGATGATGATGGCTTCACCACCCATAATGAACAACACTAGTATGGTGGAGAGTGATTTATTGTATGGCGTATATTTGGATGATGAGATGATGATGATGAACCATCATCATGAGTACGCGGGTACTTTGATGGATAATCAACATTCTTATTATGTTTCTCCTCAGGAGGAGGAGGAGGTTCTTCTTCAAGATTTTGCACTTGAGATGATGGACATTGTTTGA 873 0.4376 MPAPTQQEPNSSNNKKKQCTSTNCNNISSSSDNEEGPMMIMNNNNKKYRGVRRRQWGRYAAEIRDPLARKQRWLGTFSTPEEAARAYDAAARAIRGHRARTNFPYPHDFYYSPHHHQTNSSSPSSLDMMLLRFLMDFINTCDNPALVSSAQHFYKQLLSKETCSSSFASSFSTCGIAVPEEEEEDKIHHDDVPTTAMTNVMCNNNPEWFPTTTNNNNMMMMASPPIMNNTSMVESDLLYGVYLDDEMMMMNHHHEYAGTLMDNQHSYYVSPQEEEEVLLQDFALEMMDIV* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2171 290 MobiDBLite consensus disorder prediction 1 40 - -
Aev01g2171 290 Gene3D AP2/ERF domain 46 105 IPR036955 GO:0003700|GO:0006355
Aev01g2171 290 MobiDBLite consensus disorder prediction 1 46 - -
Aev01g2171 290 CDD AP2 46 105 IPR001471 GO:0003700|GO:0006355
Aev01g2171 290 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 149 - -
Aev01g2171 290 SMART rav1_2 47 112 IPR001471 GO:0003700|GO:0006355
Aev01g2171 290 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Aev01g2171 290 Pfam AP2 domain 47 97 IPR001471 GO:0003700|GO:0006355
Aev01g2171 290 SUPERFAMILY DNA-binding domain 47 105 IPR016177 GO:0003677
Aev01g2171 290 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 13 149 - -
Aev01g2171 290 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Aev01g2171 290 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2171 Aev-Chr1 25997024 25997896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2171 47 136 AP2-EREBP Transcription Factor Family AT1G24590 62.222 1.28e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev01g2171 AP2 7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2171 - - aip:107611489 124.405