Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2148 ATGGGGTGTGTGGTGGTGAAGCAGGGGGTGTCGGTGACGCCGGCGGGGGAGAACTCAGGCGAGTCGGATAGGAACAGGAGGAAGAAGGGTGAGTCGATAACGGGAGCGAGTCGGAGCGAGTTGGGTGAGTCAGGGAGGGCGAGTTCGAACGGTGGTGGTGGAGGGAGCGAGTCGCTGAGCTTCAGGCTGGTGGGGAACCTGCAGAAGTACGTGGAAGGGGAGCAGGCGGCGGCGGGATGGCCTGCTTGGCTCAGCGCCGTCGCGTCGGAAGCCATTCAGGGGTGGGTGCCACTCCGAGCTGATGCTTTTGAGAAGCTTGAGAAGATAGGGCAGGGTACATATAGCAGTGTTTTCAGAGCTAGGGAGCTTGAGACTGGGAGGATAGTGGCTCTAAAGAAGGTGAGGTTTGACAATTTTGAGCCGGAAAGTGTCCGGTTTATGGCGCGAGAAATAATGATTCTTAGAAGGCTTGATCATCCAAACATCATTAAATTGGAGGGCTTGATCACTTCCAGATTGTCTTGCAGCATCTACCTTGTGTTTGAGTACATGCAGCATGATATCACAGGCCTATTGTCTAGACCTGAAATCATGTTCAGTGAATCACAGATTAAATGCTACATGAAACAGCTGTTATCTGGTCTTGAGCATTGTCACTCGCGGGGCGTAATGCACCGAGACATCAAGGGATCAAATCTTCTGGTGAATGATGAAGGGATACTGAAGGTGGCGGATTTTGGATTGGCGAATTTCTCCAATTTGGGGAACAAGCAGCCTCTTACCAGCCGTGTTGTCACCTTGTGGTACCGTCCGCCGGAACTCTTACTTGGCTCGACAAATTATGGTCCATCTGTGGATCTCTGGAGTGTTGGTTGTGTATTTGCAGAGCTTCTTATTGGGAAGCCTATACTTCAGGGAAGAACTGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCACCACCTGATGAATACTGGAAAAAGACCAAACTTCCTCATGCAACTTTGTTCAAGCCACAACAACCATATGATAGTTGCCTTCAAGAGACATTCAAAGATTTGCCTGCAACTAGTGTAAATCTGCTGCAGACCCTTCTCTCCGTCGAACCGAGCAAACGTGGGACTGCCGCATCTGCTCTCACATCAGAGTATTTCAAAACAAAACCTTATGCATGTGATCCATCAAGCATGCCAATATACCCGCCTAGCAAGGAGATTGATGCAAAACACCATGAGGAGTCAAAAAGGAAAAAGATCAGCGGGCGAGCTTGTGGACCGGAAACAAGAAAACCATCAAGAAAGCCATTAGCACTCAGTAAATTAGCCCCAGCTGAGGATTTGACATGCCAAACTCATAATTCCCAAAAGCCAAAGTTGGATGATAGCTCTATCCAAGTCCTTAAAGAAGAGGACACTAGCATTGGTGAGGATGCACCAAAGGTACCTAGTGATGAACCTGAAGATGCTTCTCATATGAAGAGTGCATCCAAAGCAGATATTCCCTTTCCTGGACCATTACAAGTTTCAAAATCGAGCGGCTTCGCATGGGCGAAAAGGCGTAAAGATGACACTTTAATGAGATCACATTGTCGATCAATTTCAAGAGGGAACCTATTCAACTCATTAGAGAGTTCTACAATAAATTCAAGGAATAATTCTGAGTCAAGAAACCATGAAAACAAGGAATTATGTGGGAGCCGCAGCAACTCTAGGGGCCATGACCTACTTGAAATATCTAAGCTTGTAATGCAGAACCAATGGAGTAGGTTTGATCGTCCCGACTCATTCGATACTTCTGATGAGTACCATTCACAAGAACTATCTATGGCGCTTTATCGCAGAGAAGATTCATTGTCCAAGAGAAGTAACCAGAGTTCTCAGGATCAAGGAGACAAGGTTGAATTCTCAGGACCCTTAATATCTCAAATGCACACAGTTGATGAGATCTTGGAGAGACATGAGCGGCACATAAGGCGAACTGTCAGAAGATCATGGTTTCAGAAAGGTGGATTGCAGGTAAGAAGAATGGGAAATAAAGTGACTGCATGA 2055 0.4681 MGCVVVKQGVSVTPAGENSGESDRNRRKKGESITGASRSELGESGRASSNGGGGGSESLSFRLVGNLQKYVEGEQAAAGWPAWLSAVASEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMQHDITGLLSRPEIMFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNDEGILKVADFGLANFSNLGNKQPLTSRVVTLWYRPPELLLGSTNYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTKLPHATLFKPQQPYDSCLQETFKDLPATSVNLLQTLLSVEPSKRGTAASALTSEYFKTKPYACDPSSMPIYPPSKEIDAKHHEESKRKKISGRACGPETRKPSRKPLALSKLAPAEDLTCQTHNSQKPKLDDSSIQVLKEEDTSIGEDAPKVPSDEPEDASHMKSASKADIPFPGPLQVSKSSGFAWAKRRKDDTLMRSHCRSISRGNLFNSLESSTINSRNNSESRNHENKELCGSRSNSRGHDLLEISKLVMQNQWSRFDRPDSFDTSDEYHSQELSMALYRREDSLSKRSNQSSQDQGDKVEFSGPLISQMHTVDEILERHERHIRRTVRRSWFQKGGLQVRRMGNKVTA* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2148 684 Gene3D Phosphorylase Kinase; domain 1 90 185 - -
Aev01g2148 684 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Aev01g2148 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Aev01g2148 684 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2148 684 MobiDBLite consensus disorder prediction 618 640 - -
Aev01g2148 684 MobiDBLite consensus disorder prediction 545 571 - -
Aev01g2148 684 ProSiteProfiles Protein kinase domain profile. 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2148 684 MobiDBLite consensus disorder prediction 20 34 - -
Aev01g2148 684 Gene3D Transferase(Phosphotransferase) domain 1 186 426 - -
Aev01g2148 684 MobiDBLite consensus disorder prediction 405 441 - -
Aev01g2148 684 PANTHER CELL DIVISION PROTEIN KINASE 31 669 - -
Aev01g2148 684 MobiDBLite consensus disorder prediction 406 431 - -
Aev01g2148 684 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 31 669 - -
Aev01g2148 684 MobiDBLite consensus disorder prediction 37 56 - -
Aev01g2148 684 MobiDBLite consensus disorder prediction 556 570 - -
Aev01g2148 684 MobiDBLite consensus disorder prediction 1 56 - -
Aev01g2148 684 MobiDBLite consensus disorder prediction 472 506 - -
Aev01g2148 684 MobiDBLite consensus disorder prediction 472 496 - -
Aev01g2148 684 SUPERFAMILY Protein kinase-like (PK-like) 97 394 IPR011009 -
Aev01g2148 684 CDD STKc_CDK9_like 103 387 - -
Aev01g2148 684 Pfam Protein kinase domain 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2148 Aev-Chr1 25831258 25834988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2148 95 447 Core Cell Cycle Gene Families AT5G10270 47.967 3.48e-111 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aev01g2148 Pkinase 5.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2148 - - gmx:100816047 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2148 01 25831258 25834988 Aev01g2148 01 25831258 25834988 ECH