Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2141 ATGGAGAGTGAGAAGGGGGAGCTGAATTTGAACAGCAAAGAGAGTGATAATAACTGCGTTGGAAGTAATAGTAAGAGTGTTGGTTGTGATGGTTTCGTTGATAGAAGCAAAGTTAGGATTTTGTTGTGTGATAACGATTCCAAGAGCTCTGAAGAGGTTTTCACTCTTCTTATGCGATGCTCTTATCAAGTTACTTCGGTAAGATCAGCAAGGCAATTAATTGATGCGCTGAATGCCGAGCGACAATATATTGATATCATACTTGCTGAAGTTGACCTTCCCATAAAGAAGGGCATGAAGATGTTGAAGTACATAGCAAGGGACAAAGAATTGCGCCGAATACCTGTTATAATGATGTCTGCACAAGATGAGGTATCCATTGTTGTTAAGTGCTTGAAACTTGGAGCAGCAGACTATCTAGTTAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGACGCATGCTTGGGCTTGTAGAGAACAACATCTTGAATTATGACTTTGACCTGGTAGCATCAGACCCAAGTGATGCCAACACGAACAGTACCACCTTGTTCTCTGATGACACAGATGATAAGTCCAAAAGAAGCAGTAATCCTGAGGCAGGAATATCAATCCAACAAGAACAAGAGGCTACTGTTGCCATGGATACTGCTGCTGTTGAGGAGTTTCCAGATGCTTACAGATCAGAGTATCTGCCTGATGTGCCTGGAATTAGTGATCGCCGAACAGGTGTTCAGGGGCAGCACCTGCCATGCAACAAAAATACTGAGGGTAATTTTTCATCTGGTCCCAAGAAGAGTGAACTACGGATTGGACAATCATCAGCCTTCTTCACTTACGTCAAGGCAGCATCAACACTAAAGAGCAACTTCGAAGAGGTTGATCGTGTTGACAAGAACGCTGCTAAACAGATGAGGATGGAAGATATGAATCAAGCATGTGCTCAACTGAGGGATAACCTTCCAAGACATGAAAATGGAGAAACATTTGAAAGCCATTCACAAGAAGACCTACCCAGCAGTAATAATAGTATGCCTGATTCTTTCTCTATTGAGAGATCTTGTACTCCACCCGCATCGATGGAAGTTTCACAGCAAAAGCAGTACAAGGATGAGCATCTTCAAGGTGTGGTGCATCCGAGGAATGGAAGTCATCACGGTTCCGAGCCTGAAGCTTCTGGAATGAATGCCCAGCATACTTATCCATATTATATTTCAGGAGTTGTTAATCATGTTATGATGCCATCATCAGCACAACTGTATCAGAAGAATATTCAGGAGCTACAGAGTCATGCTAATTCATCTATTATTGCACAATACAACCATCACCCCCAATGTCCTCCGCATGCGCCCGGGATGACATCTTTTCCCTATTATCCAATGAGTATATGCTTGCAACCTGGTCAGATTCCTCCGAATCATTCATGGCCACCATTAGGAAGTTCAAATTCATCTGAGGCAAATTTAAGCAAAGTTGATAGAAGAGAAGCAGCGTTGATGAAGTTTAGACAGAAAAGGAAAGAACGTTGCTTTGATAAGAAAATTAGATACGTCAATCGCAAAAGACTTGCTGAAAGGCGGCCTCGTGTCAGGGGACAGTTTGTCAGAAAGTTGAATGGTGTTAATGTTGATCTTAATGGAGAACCTGCTTCAGCTGAATATGACGACGATGACGAAGAGGATGAAGACAACCTTGTGGCAAGAGATTCCTCTCCAGAGGATGCATGA 1752 0.4258 MESEKGELNLNSKESDNNCVGSNSKSVGCDGFVDRSKVRILLCDNDSKSSEEVFTLLMRCSYQVTSVRSARQLIDALNAERQYIDIILAEVDLPIKKGMKMLKYIARDKELRRIPVIMMSAQDEVSIVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNYDFDLVASDPSDANTNSTTLFSDDTDDKSKRSSNPEAGISIQQEQEATVAMDTAAVEEFPDAYRSEYLPDVPGISDRRTGVQGQHLPCNKNTEGNFSSGPKKSELRIGQSSAFFTYVKAASTLKSNFEEVDRVDKNAAKQMRMEDMNQACAQLRDNLPRHENGETFESHSQEDLPSSNNSMPDSFSIERSCTPPASMEVSQQKQYKDEHLQGVVHPRNGSHHGSEPEASGMNAQHTYPYYISGVVNHVMMPSSAQLYQKNIQELQSHANSSIIAQYNHHPQCPPHAPGMTSFPYYPMSICLQPGQIPPNHSWPPLGSSNSSEANLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGEPASAEYDDDDEEDEDNLVARDSSPEDA* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2141 583 MobiDBLite consensus disorder prediction 547 583 - -
Aev01g2141 583 Gene3D - 38 240 - -
Aev01g2141 583 MobiDBLite consensus disorder prediction 251 275 - -
Aev01g2141 583 MobiDBLite consensus disorder prediction 254 275 - -
Aev01g2141 583 MobiDBLite consensus disorder prediction 558 575 - -
Aev01g2141 583 SUPERFAMILY CheY-like 36 164 IPR011006 -
Aev01g2141 583 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 7 566 - -
Aev01g2141 583 MobiDBLite consensus disorder prediction 188 217 - -
Aev01g2141 583 MobiDBLite consensus disorder prediction 332 378 - -
Aev01g2141 583 MobiDBLite consensus disorder prediction 341 373 - -
Aev01g2141 583 Pfam CCT motif 503 545 IPR010402 GO:0005515
Aev01g2141 583 ProSiteProfiles Response regulatory domain profile. 39 157 IPR001789 GO:0000160
Aev01g2141 583 Pfam Response regulator receiver domain 40 151 IPR001789 GO:0000160
Aev01g2141 583 SMART REC_2 38 153 IPR001789 GO:0000160
Aev01g2141 583 ProSiteProfiles CCT domain profile. 503 545 IPR010402 GO:0005515
Aev01g2141 583 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 566 IPR045279 GO:0009736
Aev01g2141 583 Coils Coil 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2141 Aev-Chr1 25775799 25779876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2141 23 582 Response Regulator Gene Family AT5G61380 50.315 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Aev01g2141 Response_reg 9.8e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2141 K12127 - gmx:100786522 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2141 01 25775799 25779876 Aev01g2141 01 25775799 25779876 ECH