Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2138 ATGGAGACTGGATTTCGCTCCCTCTCCAAATTCATTTTGTGCGCTATTTCTGGAGCTCTTACGGGCTGTTTTGCCATTGCTGGAGCACTCACAGGAGCTATAGCTGGTGCATTAGCAGCTAAGGCTACTCACAGTGGTTTTATGAGGGGAGCTTCATTGGGTGCCATTGCCGGTGCGATACTCTCGGTTGAGGTGTTGGAAGCTTCCCGCGCCTACTGGTGCATGGAGCAAACTGGCTCGCGGGGCACGTCATCTATGGCTGATTTCATAGAGGAACTCGTTCGATCGAGGCTTGTAGAGGAATCACTAACACCTGCTATTTTAACTGCTTACAATTTGCAGTTTGAACAGGTTGGGCATGCTAATGCAGGCAATGATGAGTTTCATGATGTTCAAAGTGCAGTAGCACCCAGAGGATTGTCAGGGGATTCATTGAAAAGGTTACCACACCATGTGATCTCCAAGGACATGATGGCAGACATTACCTGCTGCACAATATGTTTACAGGATATTGAAGTAGGAGAAACTGCAAGGAGCTTACCAAAGTGCCATCATACATTTCACTTGGTATGTGTGGACAAATGGCTTGTCGAGAATGATTCTTGCCCTATATGCAGACAGATTGTGTAG 630 0.4698 METGFRSLSKFILCAISGALTGCFAIAGALTGAIAGALAAKATHSGFMRGASLGAIAGAILSVEVLEASRAYWCMEQTGSRGTSSMADFIEELVRSRLVEESLTPAILTAYNLQFEQVGHANAGNDEFHDVQSAVAPRGLSGDSLKRLPHHVISKDMMADITCCTICLQDIEVGETARSLPKCHHTFHLVCVDKWLVENDSCPICRQIV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2138 209 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 5 207 - -
Aev01g2138 209 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 5 207 IPR044523 -
Aev01g2138 209 ProSiteProfiles Zinc finger RING-type profile. 164 206 IPR001841 -
Aev01g2138 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 209 IPR013083 -
Aev01g2138 209 SUPERFAMILY RING/U-box 146 209 - -
Aev01g2138 209 SMART ring_2 164 205 IPR001841 -
Aev01g2138 209 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Aev01g2138 209 Pfam Ring finger domain 164 206 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2138 Aev-Chr1 25754475 25756742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2138 7 209 C3H Transcription Factor Family AT1G74410 56.863 6.22e-73 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2138 - - gmx:100800105 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2138 01 25754475 25756742 Aev01g2138 01 25754475 25756742 ECH