Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2135 ATGGAAAACCTTGTGTTAAAGGAAGAGGAGCAGATGGATTTGCCACCTGGGTTTCGGTTCCACCCAACAGATGAAGAGCTCATAAGCCATTACCTCTACAAGAAGGTTATTGACACAAACTTCACTGCAAGGGCCATTGGTGAGGTCGACCTCAACAAATCAGAGCCTTGGGATTTGCCAAGGAAAGCCAAAATGGGAGAAAAAGAGTGGTACTTTTTCTGCGTTAGAGACAGGAAATACCCAACAGGGTTAAGGACGAACAGAGCCACCGAGGCAGGGTACTGGAAAGCCACCGGAAAAGACAAGGAGATTTTCAGAGGCAAATCGCTTGTTGGAATGAAGAAAACTCTTGTTTTCTACAAAGGAAGAGCACCCAAAGGAGAAAAAAGCAACTGGGTCATGCACGAGTATCGCCTCGACGGCAAATTCTCCATCCATAATCTCCCCAAAACTGCTAAGAACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAATTCAGCTGGGAAGAAGATTCATATCTCCGGAATCATGAGATTGGACTCTTTCGGGACTGAATTGAGTTCTTATGGCTTACCACCTTTGACAGATTCTTCACCTTCTTCTTTTGGTAACAACAAGACAAAACCAATCACTGAATCGGCTTACGTGCCCTGCTTCTCCAATCCTATCGATGCTCAAAGAAACCATGGTGGTGGGGTGTTTGATTCCTTCACAAACTCCATCTATGGTGGTGTATCTTCAAACCCCATGGAAATTCTTCCAAGAATTCCAATTTCAAGTTCATCCTTATACTCTGCCACACAACAGGGCCTTCAGAACTTGTCATTGCCTGGTTCTTCTTCCTCTGTTGTTCAGGACCACACAATTCTGAGAGCCTTGTATGAAAACAACAACGGATCAAACTTGGTGAGTGGATTCAAACCCGAAAGGGAAATGATAAGTGTCTCTCAGGAAACATGCCTCAGCACTGAGATGAATGTTGAAACCTCTTCTGTGGTCTCAAATTTTGATATGGCTAGAGGGTGCTTCGACAATCAGCACCTTGAAAGCTTATGGAATTACTGA 1065 0.4441 MENLVLKEEEQMDLPPGFRFHPTDEELISHYLYKKVIDTNFTARAIGEVDLNKSEPWDLPRKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLDGKFSIHNLPKTAKNEWVICRVFQKNSAGKKIHISGIMRLDSFGTELSSYGLPPLTDSSPSSFGNNKTKPITESAYVPCFSNPIDAQRNHGGGVFDSFTNSIYGGVSSNPMEILPRIPISSSSLYSATQQGLQNLSLPGSSSSVVQDHTILRALYENNNGSNLVSGFKPEREMISVSQETCLSTEMNVETSSVVSNFDMARGCFDNQHLESLWNY* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2135 354 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Aev01g2135 354 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
Aev01g2135 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 322 - -
Aev01g2135 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 5 322 - -
Aev01g2135 354 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Aev01g2135 354 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2135 Aev-Chr1 25731691 25732950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2135 12 354 NAC Transcription Factor Family AT5G07680 58.475 8.70e-136 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev01g2135 NAM 3.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2135 - - lja:Lj0g3v0155359.1 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2135 01 25731691 25732950 Aev01g2135 01 25731691 25732950 ECH