Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2121 ATGAAGAAGCGGCAAGTGGTGGTGAGAAGAGAGGTAAGTAGTAACAGTAATAGTAGTAATGATGATGATGTTGGATACGGCGAGTGCTTGAAGAATCATGCGGCCAACAGCGGAGGCTACGCCGTGGACGGCTGCAGGGAGTTCCTCGCAACAAGTGGTGGGGCCCTCACATGTGCCGCCTGTGGTTGCCACAGAAACTTCCACCGAAGAATGAATTACAAGAATCCAGCAGGTACTACTAGTCCAAAACACTAG 255 0.5059 MKKRQVVVRREVSSNSNSSNDDDVGYGECLKNHAANSGGYAVDGCREFLATSGGALTCAACGCHRNFHRRMNYKNPAGTTSPKH* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2121 84 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 71 - -
Aev01g2121 84 PANTHER MINI ZINC FINGER PROTEIN 3 1 71 - -
Aev01g2121 84 Pfam ZF-HD protein dimerisation region 24 71 IPR006456 -
Aev01g2121 84 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 26 71 IPR006456 -
Aev01g2121 84 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 26 70 IPR006456 -
Aev01g2121 84 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2121 Aev-Chr1 25642023 25642277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2121 1 70 Zinc finger-homeobox gene family AT1G18835 69.014 2.76e-27 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev01g2121 ZF-HD_dimer 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2121 - - adu:107468004 99.3673