Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2105 ATGATGGGAAATTGCATTGGATCTCGTTCCAAGGTTGATAACATTAACACTACTACTTCTACTTATGGATCCAAACCTACCCCTGTTCATTCAAGTCCAACAATGCAAAGATTCAGTGGTAATTATGAAGGTAATAAAAATGAGTCTCTTCTTTCAAAAACTCCAAGATCTGAAGGTGAAATACTTCCTTCCCTTCATTTAAAACCCTTCACATTCATTCATCTTAAGGATGCTACTAGAAATTTCAGTCCTCAAACTCTAATTGGAGAAGGGGGATTTGGATATGTATATAAGGGGCAGATTGATGGAATGGTTGTAGCTGTGAAGAAGCTTAAACCTGAAGGTTTTCAAGGGCATAAAGAGTGGCTGTCTGAGCTCAATTATCTTGGCCAATTGCATCATCCAAATATTGTCAAACTTATTGGATACTGCTTAGATGGGGATAACCGGCTTCTAGTGTACGAGTACATGCCCAATGGAAGCTTGGAAAATCATCTATTTTGCAAGGATGCAGAACCACTTTCTTGGGCAACAAGAATCAAAGTTGCTATTGGTGCTGCTAGAGGACTAGCCTTCCTACATGAATCTGAGCAACATGTGATCTACCGTGACTTCAAGGCTTCCAACATTTTATTAGATTTGGAATTCAATGCAAAACTCTCTGATTTTGGATTGGCAAAAGAAGGTCCCACTGGCGATTGTTCTCATGTTTCTACTAAAGTCATCGGCACTCAAGGCTATGCTGCTCCTGAATATATTGCTACAGGTCGGTTGACAGCAAGGTGTGATGTTTATAGCTTTGGGGTTATGCTATTGGAACTACTAACAGGGAGAGAAGCTGTTGATAAAACAAGAAATGGGGTGGAAGGGAATCTGGTAGATTGGGTAAGGCCCTATTTGGGTGATAGGAGGAAGTTGTTCAGGATCATGGACACCAAGTTACAAGGACAGTACCCACAAAGAGCAGCATATTCTGCTGCAGTTCTTGCATTTAGGTGCATTAGTGGTGCCAAATATAGACCACACATGTCTGAGGTTTTGGATACATTGGAACACTTGCCAGTTACAAGACATTCAGCAGCAAGCCCAACTAGGCCTGAGGAGGAGAGGCCCATCTCAAGCCCAATTGGAGAGATGGTTCCTAGGCATAATCATCATCATCATTCAACAGAGGTAGCATAA 1182 0.4154 MMGNCIGSRSKVDNINTTTSTYGSKPTPVHSSPTMQRFSGNYEGNKNESLLSKTPRSEGEILPSLHLKPFTFIHLKDATRNFSPQTLIGEGGFGYVYKGQIDGMVVAVKKLKPEGFQGHKEWLSELNYLGQLHHPNIVKLIGYCLDGDNRLLVYEYMPNGSLENHLFCKDAEPLSWATRIKVAIGAARGLAFLHESEQHVIYRDFKASNILLDLEFNAKLSDFGLAKEGPTGDCSHVSTKVIGTQGYAAPEYIATGRLTARCDVYSFGVMLLELLTGREAVDKTRNGVEGNLVDWVRPYLGDRRKLFRIMDTKLQGQYPQRAAYSAAVLAFRCISGAKYRPHMSEVLDTLEHLPVTRHSAASPTRPEEERPISSPIGEMVPRHNHHHHSTEVA* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2105 393 Gene3D Transferase(Phosphotransferase) domain 1 157 370 - -
Aev01g2105 393 CDD STKc_IRAK 88 353 - -
Aev01g2105 393 ProSiteProfiles Protein kinase domain profile. 82 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2105 393 MobiDBLite consensus disorder prediction 1 32 - -
Aev01g2105 393 ProSitePatterns Protein kinases ATP-binding region signature. 88 110 IPR017441 GO:0005524
Aev01g2105 393 PANTHER BNAC02G17010D PROTEIN 34 377 - -
Aev01g2105 393 MobiDBLite consensus disorder prediction 356 393 - -
Aev01g2105 393 MobiDBLite consensus disorder prediction 9 32 - -
Aev01g2105 393 Pfam Protein kinase domain 85 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2105 393 Gene3D Phosphorylase Kinase; domain 1 53 156 - -
Aev01g2105 393 SUPERFAMILY Protein kinase-like (PK-like) 59 351 IPR011009 -
Aev01g2105 393 PANTHER OS01G0588500 PROTEIN-RELATED 34 377 - -
Aev01g2105 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2105 Aev-Chr1 25532932 25535109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2105 25 377 Glycoside Hydrolase AT3G07070 45.600 1.79e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aev01g2105 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2105 - - pvu:PHAVU_003G191400g 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2105 01 25532932 25535109 Aev01g2105 01 25532932 25535109 ECH
Aev05g1423 05 10454588 10457296 Aev01g2105 01 25532932 25535109 PCT