Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2103 ATGCCCGCAAGTTACTCAGGGAGGTCGAGAGATCGAACCAAATTTCGTACGCGATTTGTGATTTGGTTCATCATTTCATCATTTGCGTACGCTATTACTGTCGGTGATAGCACATGTCTTTTTCCTCGGTTGAACAAGAAAACTGTGGGTCCTGATTTCACAATGGGGAAGTCACCGGCAAAATGGATCAAAACAGTTCTGTTTGGGAAAAAGTCTTCCAAATCACATATTTCAAAAGGAAGAGAGAAGTTTGTTAATCGAAAAGAAGGATTTGTGGCTTCCAAGGTGTCCGAAACTGGTTTGGCTTTAGATCCAACCCCAAATACCATTGTCAGAAATGAGGAAGACTTGGAGCTGGAGAATAAAGAGGCAGACACTGTTTTACCTGAAAATCAAGAAATAGAAACAGTGGGATCTGTTCTCCAAGATGCACCACCTGATCCCGAGACAATGAGGCTGGAGGAAGCAGCAACAAAGGCACAGGCTGCTTTCAGGGGTTATTTGGCTCGGAGGGCATTTAGGGCACTAAAAGGCATAATAAGGTTGCAAGCACTTATCCGAGGACACTTGGTTAGGAGACAAGCTGTGGCTACATTGTGCTGTATGTACGGGGTTGTCAAGTTACAAGCACTTGTACGTGGAGGAAGAGTTAGACAAGCGGATATTGGATTTGAAATCCAAGAGAAGTGTAATTTAACGAAGTCTCTGGATGGCAAACATGTCAAGCCAGTTGCTATACCCACAAAAGTTATGAATCTGTCAGCAAATGCTTTCACTCGTAAGCTTCTTGCTTCATCAAGTACAGTAATGGCCCTTCGTTTGCAATACATTCCGGGAGATCCGAATTCAGTCCTAAGTTGGTTGGAGCGCTGGTCAGCTACTTACTTTTGGAAACCAGTTCCCCAGCCCAAGAAAATTCGAGACACTAAGAGCCAGAGAAAGCAGGGTAACGTTTCAATTGGAGAAGCTCAATTGAGCAAGTCTAAGCGAACCAACCGGAAGATTCCTAGTGCAAATCTTGACTCTGTCCCAGTGCAACCAAATCCTGAATTTGAGAAACCAAAGCGAAACTTAAGGAAAATTACAAGCCAGCCTGCAGATCCTGTGCAGGAAAATCCGCAACATGAGCTTGAAAAGGTTAAACGTAACTTGAGAAAGGTTCATAACCCAGTTGTTGAGAATGCTGCTGTGTCAGAAGTTGAATCTGAGACCCCAAAGCAGCATTTGGAAAGGGCAACAATTACTCCAGGCAATGTTGTTTTGGAACAGGGGGTCATCAGTTCTAATGAAAAGATCAAGAAGGAAACAATATTACCCGTTTCCAGTGTGCTTGATGTAGAAACTACTCCTACACATTCCATTAATAAGGAGGTGTCTGCCACTCGAAGCTGCAATCAAGTGGCTGTGGAATCGAAGCCTTTGACAGAGATTACAAGTAATGATGAAAACATTGCTGAAGATGAAGTGAAAAATGAGCCAAAAGATTTGCCAGAGGCCAGTTGTAAAGTTGAAAATTCTCATGTAACAAATGGAGATTTGAGTCACAAGGAAGATCCAGCAGGCAATGAAAACCAAAAACCTACTCGAAAAACCTCAATTGCAGCAAAGCCGGAGCGTGCAGAGAATGGTTTACAGAACAGTCCAACGCTACCGAGTTACATGGCAGCAACTGAATCTGCCAAGGCAAAGTTAAGGGCACAAGGATCCCCACGGCTTTCGAATGACGGAAGCGAGAAAACCAACCTTGCCAGACGACATTCTTTGCCATCTTCAACTAACAGCAAAATTAGCTCGCATTCACCTAGGACACAGAGACCAGTCCAATCAGGTGGCAAAGGGAGCCACAGAAGTGACAGAACCGTATCCTCCTCATCTAGAGACGCGAATGGAAAGGTAATTCAAGCAGAGTGGAGGAGGTGA 1920 0.4417 MPASYSGRSRDRTKFRTRFVIWFIISSFAYAITVGDSTCLFPRLNKKTVGPDFTMGKSPAKWIKTVLFGKKSSKSHISKGREKFVNRKEGFVASKVSETGLALDPTPNTIVRNEEDLELENKEADTVLPENQEIETVGSVLQDAPPDPETMRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCCMYGVVKLQALVRGGRVRQADIGFEIQEKCNLTKSLDGKHVKPVAIPTKVMNLSANAFTRKLLASSSTVMALRLQYIPGDPNSVLSWLERWSATYFWKPVPQPKKIRDTKSQRKQGNVSIGEAQLSKSKRTNRKIPSANLDSVPVQPNPEFEKPKRNLRKITSQPADPVQENPQHELEKVKRNLRKVHNPVVENAAVSEVESETPKQHLERATITPGNVVLEQGVISSNEKIKKETILPVSSVLDVETTPTHSINKEVSATRSCNQVAVESKPLTEITSNDENIAEDEVKNEPKDLPEASCKVENSHVTNGDLSHKEDPAGNENQKPTRKTSIAAKPERAENGLQNSPTLPSYMAATESAKAKLRAQGSPRLSNDGSEKTNLARRHSLPSSTNSKISSHSPRTQRPVQSGGKGSHRSDRTVSSSSRDANGKVIQAEWRR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2103 639 Gene3D - 150 201 - -
Aev01g2103 639 Pfam IQ calmodulin-binding motif 177 194 IPR000048 GO:0005515
Aev01g2103 639 Pfam IQ calmodulin-binding motif 155 174 IPR000048 GO:0005515
Aev01g2103 639 MobiDBLite consensus disorder prediction 313 344 - -
Aev01g2103 639 PANTHER PROTEIN IQ-DOMAIN 31 55 624 - -
Aev01g2103 639 MobiDBLite consensus disorder prediction 473 639 - -
Aev01g2103 639 ProSiteProfiles IQ motif profile. 153 181 IPR000048 GO:0005515
Aev01g2103 639 SMART iq_5 152 174 IPR000048 GO:0005515
Aev01g2103 639 SMART iq_5 175 196 IPR000048 GO:0005515
Aev01g2103 639 Pfam Protein of unknown function (DUF4005) 538 617 IPR025064 -
Aev01g2103 639 MobiDBLite consensus disorder prediction 483 501 - -
Aev01g2103 639 MobiDBLite consensus disorder prediction 305 352 - -
Aev01g2103 639 ProSiteProfiles IQ motif profile. 177 199 IPR000048 GO:0005515
Aev01g2103 639 PANTHER IQ-DOMAIN 5-RELATED 55 624 - -
Aev01g2103 639 MobiDBLite consensus disorder prediction 509 524 - -
Aev01g2103 639 MobiDBLite consensus disorder prediction 570 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2103 Aev-Chr1 25518187 25523536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2103 55 639 IQD Protein Family AT1G74690 44.281 1.69e-123 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2103 - - gmx:100794636 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0454 03 3319682 3322154 Aev01g2103 01 25518187 25523536 ECH
Aev01g2103 01 25518187 25523536 Aev01g2103 01 25518187 25523536 ECH
Aev05g1420 05 10403764 10408210 Aev01g2103 01 25518187 25523536 PCT