Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2089 ATGGCGGGTGGAAGGGTCGTCTTCAGCGCAAGCGTTCATCATCCCAACATGAACAATAATAACAACAATCACAATAACAATATTCTGCTTCAGAATCAAACCATTTCCGAGCCTCTTTTCCTTTCTGCTCCTGCTTCTTTCCTCGGTTCAAGATCTATGGTGAGTTTTGAAGATGTACAGGGAGGGAAGGGGTGTAACGGTTCGTTCTTCCGCGCGTACGATGCGGAGGAGAACGGCGATGACGGCATGGACGATTACTTCCACCAACCGGAGAAAAAGCGGCGGCTCTCGGCGGATCAAGTTCAGTTTCTGGAGAAGAGTTTCGAGGAAGAGAACAAGCTTGAGCCAGAGAGGAAGACGAAGCTCGCTAAAGACCTTGGATTGCAGCCGCGACAAGTCGCTATATGGTTCCAGAACCGCCGCGCACGGTGGAAGACCAAGCAGCTCGAGAAGGATTACGATTCCCTTCATTCTAGCTTTGAGAGCCTCAAGTCCAACTACGACAACCTCCTCAAGGAGAAAGATAGGTTGAAAGCTGAGGTGGCGAGGCTGATGGAGAAGGTGGTTATGAGGGAGAAAGAAGGGGGGAATGAGATGAAAAGTCATGTTGAGAGTGAGAGTACCGAAACAAATGATGAAGGATTGCTGCATCAAGAACCATCAGCAGAGAAGGCTATGATTGTTGAGTCAGTTTCAGAAGGATGCAAGCATGAGGAAATCAGTTCAGTGAAGAGTGACATACTGGACTGTGAAAGCCCGCATTACACGGACTCTGCTCTGCTGGAAGCAGGGGATTCCTCCTACGTGTTCGAGCCCGACCAATCGGATGTGTCGCAGGACGAGGAAGACAACCTTAGCAAGTGCCTCTTCAATGCTTACATCTTCCCTAAGCTTGAACACGTCCATTACTCCCACCCGCCTGAAACTCATTCCTGCAATTTTGGATTCCAGGAGGAAGATCATGCCTTTTGGACATGGTCTTACTGA 987 0.4924 MAGGRVVFSASVHHPNMNNNNNNHNNNILLQNQTISEPLFLSAPASFLGSRSMVSFEDVQGGKGCNGSFFRAYDAEENGDDGMDDYFHQPEKKRRLSADQVQFLEKSFEEENKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDSLHSSFESLKSNYDNLLKEKDRLKAEVARLMEKVVMREKEGGNEMKSHVESESTETNDEGLLHQEPSAEKAMIVESVSEGCKHEEISSVKSDILDCESPHYTDSALLEAGDSSYVFEPDQSDVSQDEEDNLSKCLFNAYIFPKLEHVHYSHPPETHSCNFGFQEEDHAFWTWSY* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2089 328 Coils Coil 160 194 - -
Aev01g2089 328 CDD homeodomain 92 148 IPR001356 GO:0003677
Aev01g2089 328 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Aev01g2089 328 Gene3D - 142 193 - -
Aev01g2089 328 Pfam Homeodomain 92 145 IPR001356 GO:0003677
Aev01g2089 328 Gene3D - 95 141 - -
Aev01g2089 328 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54 26 325 - -
Aev01g2089 328 PRINTS Lambda-repressor HTH signature 118 127 IPR000047 GO:0003677
Aev01g2089 328 PRINTS Lambda-repressor HTH signature 127 143 IPR000047 GO:0003677
Aev01g2089 328 SMART HOX_1 90 151 IPR001356 GO:0003677
Aev01g2089 328 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981|GO:0006355
Aev01g2089 328 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 26 325 IPR045224 GO:0003700
Aev01g2089 328 MobiDBLite consensus disorder prediction 194 214 - -
Aev01g2089 328 Pfam Homeobox associated leucine zipper 147 188 IPR003106 GO:0006355|GO:0043565
Aev01g2089 328 SUPERFAMILY Homeodomain-like 78 149 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2089 Aev-Chr1 25432556 25434302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2089 49 326 Homeobox Transcription Factor Family AT3G01470 39.068 1.80e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev01g2089 Homeodomain 4.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2089 - - gmx:100799054 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2089 01 25432556 25434302 Aev01g2089 01 25432556 25434302 ECH