Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2080 ATGGGAAACTGTAACGCATGCGTTAGAGGAAACGACGTCGTCGCAGGGGACAATAGCCCGAGCGAGTCAAACCGGCCCGGAAGAAAGAACAAAAAAACCCGGCCGAACCCATACGCAGAGGAAGGCTTATTTCGGAACTCTCCAGCTCCGATCCGGGTCCTGAAGGACGTGATCCCGTTGGGCCCGCACCAGGCCCGAATCGGTGACAAGTACATACTGGGCCGCGAACTGGGCCGCGGCGAGTTCGGCATCACGTACCTCTGCACTGACCGCGAAACGAAGCAGGAACTGGCCTGCAAGTCAATCTCGAAGCGGAAGCTACGAACCGCCGTCGATGTGGAAGACGTTCGGCGCGAGGTCGCAATCATGAACGCGCTACCCGATCACCCTAACTTGGTGAAGCTTAGAGCTACGTATGAGGATGATGAGAATGTTCATCTCGTCATGGAGCTTTGTGCTGGAGGAGAGCTTTTCGATAGGATCGTCGCCAGAGGCCATTACAGTGAGCGTGCGGCGGCGCATGTGGCGAGGACCATTGCCGAGGTTGTTAGGATGTGTCACTCTAATGGCGTCATGCATAGAGACCTTAAGCCTGAGAATTTCTTGTTCGCTAATAAGAAGGAGAATTCGGTTCTTAAGGCCATTGATTTTGGACTCTCCGTCTTCTTCAAACCTGGGGAGAGGTTTTCGGAGATTGTTGGGAGTCCGTACTACATGGCGCCGGAGGTATTGAAGAGGAATTACGGGCCGGAGGTTGATGTGTGGAGCGCCGGCGTGATTCTCTATATTTTGTTATGTGGGGTTCCTCCGTTTTGGGCAGAGTCGGAGCAAGGGGTGGCGTTGGCAATATTGAGGGGGGTGATTGACTTCAAGAGGGAGCCATGGCCGCAGATATCGGAAAGTGCAAAGAGCCTCGTGAGGCAGATGTTGGAACCCGATCCTAAGAAACGCCTGACGGCTGAACAGGTTCTTGAACATTCCTGGCTGCAGAATGCAAAGAAAGCTTCAAATGTTCCATTGGGAGATATTGTAATTGCGGAACATTTATCAGTCGAAGAGGTAGAAATAATCAAAGATATGTTTACATTGATGGATACTGACAGAGACGGACGAGTAACATATGAGGAACTTAAGGCTGGGTTGAAGAAGGTTGGTTCGCAATTGGCTGAGCCAGAGATAAGGATGCTGATGGAAGTGGCTGATGTTGATGGGAATGGAGTACTCGACTATGGAGAGTTTGTAGCTGTGACGATTCACTTGCAAAGAATGGAAAATGATGAGCATATCCGCAAAGCTTTCATGTTCTTCGACAAAGATGGGAATGGCTATATTGAGTTAGGCGAGCTCGAGGAAGCATTAGCAGATGAGTCAGGAGAAACTGATACTGATGTGTTGAATGATATCATGCGTGAAGTTGACACTGACAAGGATGGTCGCATCAGTTACGAGGAGTTTGTGGCAATGATGAAAACAGGAACTGACTGGAGAAAAGCATCTAGGCAGTATTCAAGGGAGAGGTTCAAGAGCTTAAGCATAAACTTGATGAAGGATGGCTCGCTTCAGCTTCACGATGCGATTAGTGGTCAAGCTGTAGTGGTTTGA 1602 0.4988 MGNCNACVRGNDVVAGDNSPSESNRPGRKNKKTRPNPYAEEGLFRNSPAPIRVLKDVIPLGPHQARIGDKYILGRELGRGEFGITYLCTDRETKQELACKSISKRKLRTAVDVEDVRREVAIMNALPDHPNLVKLRATYEDDENVHLVMELCAGGELFDRIVARGHYSERAAAHVARTIAEVVRMCHSNGVMHRDLKPENFLFANKKENSVLKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAESEQGVALAILRGVIDFKREPWPQISESAKSLVRQMLEPDPKKRLTAEQVLEHSWLQNAKKASNVPLGDIVIAEHLSVEEVEIIKDMFTLMDTDRDGRVTYEELKAGLKKVGSQLAEPEIRMLMEVADVDGNGVLDYGEFVAVTIHLQRMENDEHIRKAFMFFDKDGNGYIELGELEEALADESGETDTDVLNDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSINLMKDGSLQLHDAISGQAVVV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2080 533 ProSitePatterns EF-hand calcium-binding domain. 365 377 IPR018247 -
Aev01g2080 533 ProSitePatterns EF-hand calcium-binding domain. 473 485 IPR018247 -
Aev01g2080 533 Pfam EF-hand domain pair 427 490 IPR002048 GO:0005509
Aev01g2080 533 Pfam EF-hand domain pair 357 416 IPR002048 GO:0005509
Aev01g2080 533 Gene3D - 346 419 - -
Aev01g2080 533 ProSiteProfiles EF-hand calcium-binding domain profile. 388 423 IPR002048 GO:0005509
Aev01g2080 533 CDD EFh 428 490 IPR002048 GO:0005509
Aev01g2080 533 PANTHER SERINE/THREONINE-PROTEIN KINASE 20 509 - -
Aev01g2080 533 CDD STKc_CAMK 70 328 - -
Aev01g2080 533 ProSiteProfiles EF-hand calcium-binding domain profile. 460 495 IPR002048 GO:0005509
Aev01g2080 533 ProSiteProfiles Protein kinase domain profile. 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2080 533 PANTHER BNAA09G44420D PROTEIN 20 509 - -
Aev01g2080 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Aev01g2080 533 MobiDBLite consensus disorder prediction 15 43 - -
Aev01g2080 533 SMART efh_1 464 492 IPR002048 GO:0005509
Aev01g2080 533 SMART efh_1 428 456 IPR002048 GO:0005509
Aev01g2080 533 SMART efh_1 356 384 IPR002048 GO:0005509
Aev01g2080 533 SMART efh_1 392 420 IPR002048 GO:0005509
Aev01g2080 533 Gene3D Transferase(Phosphotransferase) domain 1 157 342 - -
Aev01g2080 533 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Aev01g2080 533 ProSitePatterns EF-hand calcium-binding domain. 437 449 IPR018247 -
Aev01g2080 533 MobiDBLite consensus disorder prediction 24 38 - -
Aev01g2080 533 SMART serkin_6 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2080 533 Gene3D - 420 531 - -
Aev01g2080 533 SUPERFAMILY EF-hand 342 516 IPR011992 -
Aev01g2080 533 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Aev01g2080 533 ProSiteProfiles EF-hand calcium-binding domain profile. 424 459 IPR002048 GO:0005509
Aev01g2080 533 SUPERFAMILY Protein kinase-like (PK-like) 67 336 IPR011009 -
Aev01g2080 533 Pfam Protein kinase domain 73 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2080 533 Gene3D Phosphorylase Kinase; domain 1 72 156 - -
Aev01g2080 533 ProSiteProfiles EF-hand calcium-binding domain profile. 352 387 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2080 Aev-Chr1 25362416 25365859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2080 1 533 EF-hand Containing Proteins AT1G18890 76.673 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aev01g2080 Pkinase 3.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2080 K13412 - gmx:100779935 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2080 01 25362416 25365859 Aev01g2080 01 25362416 25365859 ECH