Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev01g2067 | ATGTCTTGCGCCGCCGCAGACTCCGCCGTCTCCGGCGACGCCCCCGCCGCTGGCGAGATCATGCTGTTTGGGGTTAGGGTTGTGGTTGATTCGATGAGGAAGAGTGTGAGTATGAACAATCTCTCTCAGTACGTGCATCCTCAGGAAGCCTCCAATAACAACAACAGCAGCAGCAACGACAACAAAGAGGCCGTCGCCGCGCCTGGCGGTTACGCCTCCGCCGATGACGCCGCTCCTCACAACGCCGGCAAGCACCGCGAGCGCGAGCGCAAAAGAGGTATTCCGTGGACAGAGGAAGAACACAAGCTGTTCCTGATTGGATTGCAGAAGGTAGGAAAAGGTGATTGGAGAGGAATCTCCAGGAACTACGTGAAGACGAGGACTCCGACTCAGGTGGCTAGCCACGCTCAGAAGTACTTCCTCCGGCGGAGCAACCTCAACCGCCGTCGCCGTAGATCCAGCCTCTTTGATATCACTGCTGATTCTGTCTCTGGAATCCCAATGGAGGAAGAACAGATCCAGAGTGGAGATGCAGCCCCTGAGAGCAGCAACATCAACGGGTTCCCGATGGTGCCGGTTTATCCGATGGGTGCTGGTTCTGGAATGATCTCGGTCCAAGCTGGGAATCCGATGGAGGAACTCACTCTGGGACAAGGAAACATGGAGCCCAATGTCCCAACCAAGTTACCCTGTCCAATTCCCGTTGTTCTGAATCCGAAAGCCTCCATAGTCTCTGATGTCACCTCGGCCGGTTCGAGTTCAGCTGTTGATCCACCAACACTGTCCCTGGGGCTATCCTTCACATCAGATCAAAGACAGACATCATCAAGACACCCAGCTTTACGTGCAATTCCCTGTTTAAACAACGGCGATAGCATCATAAGTGTTGCTTGA | 894 | 0.5459 | MSCAAADSAVSGDAPAAGEIMLFGVRVVVDSMRKSVSMNNLSQYVHPQEASNNNNSSSNDNKEAVAAPGGYASADDAAPHNAGKHRERERKRGIPWTEEEHKLFLIGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITADSVSGIPMEEEQIQSGDAAPESSNINGFPMVPVYPMGAGSGMISVQAGNPMEELTLGQGNMEPNVPTKLPCPIPVVLNPKASIVSDVTSAGSSSAVDPPTLSLGLSFTSDQRQTSSRHPALRAIPCLNNGDSIISVA* | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev01g2067 | 297 | ProSiteProfiles | SANT domain profile. | 96 | 144 | IPR017884 | - | |
Aev01g2067 | 297 | Pfam | Myb-like DNA-binding domain | 95 | 140 | IPR001005 | - | |
Aev01g2067 | 297 | MobiDBLite | consensus disorder prediction | 47 | 63 | - | - | |
Aev01g2067 | 297 | CDD | SANT | 95 | 140 | IPR001005 | - | |
Aev01g2067 | 297 | SMART | sant | 92 | 142 | IPR001005 | - | |
Aev01g2067 | 297 | Gene3D | - | 94 | 146 | - | - | |
Aev01g2067 | 297 | PANTHER | KIN2 | 15 | 297 | - | - | |
Aev01g2067 | 297 | PANTHER | TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED | 15 | 297 | - | - | |
Aev01g2067 | 297 | ProSiteProfiles | Myb-like domain profile. | 88 | 140 | IPR001005 | - | |
Aev01g2067 | 297 | MobiDBLite | consensus disorder prediction | 47 | 94 | - | - | |
Aev01g2067 | 297 | MobiDBLite | consensus disorder prediction | 79 | 94 | - | - | |
Aev01g2067 | 297 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 88 | 144 | IPR017930 | - | |
Aev01g2067 | 297 | SUPERFAMILY | Homeodomain-like | 90 | 145 | IPR009057 | - | |
Aev01g2067 | 297 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 91 | 142 | IPR006447 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev01g2067 | Aev-Chr1 | 25235304 | 25236812 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Aev01g2067 | Myb_DNA-binding | 7.9e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev01g2067 | - | - | aip:107632799 | 413.69 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev01g2067 | 01 | 25235304 | 25236812 | Aev08g2185 | 08 | 21055066 | 21057655 | PCT |