Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2067 ATGTCTTGCGCCGCCGCAGACTCCGCCGTCTCCGGCGACGCCCCCGCCGCTGGCGAGATCATGCTGTTTGGGGTTAGGGTTGTGGTTGATTCGATGAGGAAGAGTGTGAGTATGAACAATCTCTCTCAGTACGTGCATCCTCAGGAAGCCTCCAATAACAACAACAGCAGCAGCAACGACAACAAAGAGGCCGTCGCCGCGCCTGGCGGTTACGCCTCCGCCGATGACGCCGCTCCTCACAACGCCGGCAAGCACCGCGAGCGCGAGCGCAAAAGAGGTATTCCGTGGACAGAGGAAGAACACAAGCTGTTCCTGATTGGATTGCAGAAGGTAGGAAAAGGTGATTGGAGAGGAATCTCCAGGAACTACGTGAAGACGAGGACTCCGACTCAGGTGGCTAGCCACGCTCAGAAGTACTTCCTCCGGCGGAGCAACCTCAACCGCCGTCGCCGTAGATCCAGCCTCTTTGATATCACTGCTGATTCTGTCTCTGGAATCCCAATGGAGGAAGAACAGATCCAGAGTGGAGATGCAGCCCCTGAGAGCAGCAACATCAACGGGTTCCCGATGGTGCCGGTTTATCCGATGGGTGCTGGTTCTGGAATGATCTCGGTCCAAGCTGGGAATCCGATGGAGGAACTCACTCTGGGACAAGGAAACATGGAGCCCAATGTCCCAACCAAGTTACCCTGTCCAATTCCCGTTGTTCTGAATCCGAAAGCCTCCATAGTCTCTGATGTCACCTCGGCCGGTTCGAGTTCAGCTGTTGATCCACCAACACTGTCCCTGGGGCTATCCTTCACATCAGATCAAAGACAGACATCATCAAGACACCCAGCTTTACGTGCAATTCCCTGTTTAAACAACGGCGATAGCATCATAAGTGTTGCTTGA 894 0.5459 MSCAAADSAVSGDAPAAGEIMLFGVRVVVDSMRKSVSMNNLSQYVHPQEASNNNNSSSNDNKEAVAAPGGYASADDAAPHNAGKHRERERKRGIPWTEEEHKLFLIGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITADSVSGIPMEEEQIQSGDAAPESSNINGFPMVPVYPMGAGSGMISVQAGNPMEELTLGQGNMEPNVPTKLPCPIPVVLNPKASIVSDVTSAGSSSAVDPPTLSLGLSFTSDQRQTSSRHPALRAIPCLNNGDSIISVA* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2067 297 ProSiteProfiles SANT domain profile. 96 144 IPR017884 -
Aev01g2067 297 Pfam Myb-like DNA-binding domain 95 140 IPR001005 -
Aev01g2067 297 MobiDBLite consensus disorder prediction 47 63 - -
Aev01g2067 297 CDD SANT 95 140 IPR001005 -
Aev01g2067 297 SMART sant 92 142 IPR001005 -
Aev01g2067 297 Gene3D - 94 146 - -
Aev01g2067 297 PANTHER KIN2 15 297 - -
Aev01g2067 297 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 15 297 - -
Aev01g2067 297 ProSiteProfiles Myb-like domain profile. 88 140 IPR001005 -
Aev01g2067 297 MobiDBLite consensus disorder prediction 47 94 - -
Aev01g2067 297 MobiDBLite consensus disorder prediction 79 94 - -
Aev01g2067 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 144 IPR017930 -
Aev01g2067 297 SUPERFAMILY Homeodomain-like 90 145 IPR009057 -
Aev01g2067 297 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 91 142 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2067 Aev-Chr1 25235304 25236812 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev01g2067 Myb_DNA-binding 7.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2067 - - aip:107632799 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2067 01 25235304 25236812 Aev08g2185 08 21055066 21057655 PCT