Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2054 ATGGCAATCCCAATACCCAGTCGGCAGCTATTCATAGACGGAGAGTGGAAACCCCCAATCCTCAACACCCGAATCCCAATCATCAACCCCTCCACCCAACACTCCATCGGTGACATCCCTGCTGCTACTAAGGAAGATGTCGACATCGCCGTCGCCGCTGCCAAAAGGGCACTTTCCCGCAACAGCGGCAAAGACTGGTCTTCTGCTCCCGGCGCTGTCCGTGCCCGCTATCTCCGTGCCATCGCTGCCAAGGTTACTGAGAGAAAGGATCAGCTCGCAAAGCTTGAAGCCCTTGATTGTGGAAAGCCACTCGATGAAGCCGCTTGGGACATAGACGATGTTGCTGGTTGCTTCGAGTTCTATGCTGACCTCGCGGAGAAATTGGATGCACAGCAAAAGGCTCCTGTTTCTCTTCCTATGGAGACATTCAAGTCTTATGTACTTAAGGAGCCCATTGGGGTAGTTGGGTTGATCACTCCATGGAACTATCCTCTGTTAATGGCTACATGGAAGGTTGCTCCTGCTCTGGCTGCTGGTTGTGCTGCGATATTGAAGCCTTCTGAATTGGCATCTGTGACATGTTTGGAGCTTGCCGATATATGCAGAGAAGTAGGCCTTCCGCCGGGTGTATTTAACATTCTCACTGGATTAGGTCCAGACGCTGGTGCTCCTTTAGCTGCCCATCCTGATGTAGACAAGATAGCCTTTACTGGAAGCTCTGCAACTGGAAGCAAGGTTATGGCAGCTGCTGCTCAGATGGTCAAGCCTGTTTCACTGGAGTTAGGAGGAAAAAGCCCAATCATTGTTTTTGAGGATGTTGATCTTGATAAGGCTGCTGAATGGACCCTTTTTGGCTGCTTCTGGACAAATGGCCAGATATGCAGTGCAACTTCCCGCCTTATTGTACATGAAAGTATAGCAAAAGAATTTTTGGATAGACTTGTGAAATGGTGCAAAAACATCAAAATTTCAGATCCCTTGGAAGAAGGTTGCAGGCTTGGCCCTGTTGTTAGTGAAGGACAGTATGAAAAAATATTGAAGTTTATCTCAAATGCTAAGAGTGAGGGTGCAACCATTTTGACTGGTGGATCTCGCCCAGAGCATCTAAAGAAGGGATTCTTTATTGAACCGACAATCATAACTGATGTGACTACCTCCATGCAAATTTGGAGAGAAGAAGTATTTGGACCAGTTCTCTGTGTGAAAACATTCAGTACTGAGGAAGAAGCTATTCATCTCGCGAATGACACTATCTATGGGTTAGGTTCTGCTGTCATATCCAATGATCTAGAAAGATGTGATCGCGTATCTAAGGCTTTTAAAGCTGGAATTGTATGGATCAATTGCTCACAACCATGCTTCACTCAAGCTCCATGGGGAGGCACCAAGCGCAGCGGTTTTGGTCGTGAATTAGGACAATGGGGACTTGAAAACTACTTGAGCGTGAAGCAAGTGACTCAGTATATATCTGAAGAACCATGGGGCTGGTACCAGTCTCCTTCAAAACTGTGA 1512 0.4716 MAIPIPSRQLFIDGEWKPPILNTRIPIINPSTQHSIGDIPAATKEDVDIAVAAAKRALSRNSGKDWSSAPGAVRARYLRAIAAKVTERKDQLAKLEALDCGKPLDEAAWDIDDVAGCFEFYADLAEKLDAQQKAPVSLPMETFKSYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELADICREVGLPPGVFNILTGLGPDAGAPLAAHPDVDKIAFTGSSATGSKVMAAAAQMVKPVSLELGGKSPIIVFEDVDLDKAAEWTLFGCFWTNGQICSATSRLIVHESIAKEFLDRLVKWCKNIKISDPLEEGCRLGPVVSEGQYEKILKFISNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEEEAIHLANDTIYGLGSAVISNDLERCDRVSKAFKAGIVWINCSQPCFTQAPWGGTKRSGFGRELGQWGLENYLSVKQVTQYISEEPWGWYQSPSKL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2054 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Aev01g2054 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Aev01g2054 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 1 500 - -
Aev01g2054 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 500 - -
Aev01g2054 503 SUPERFAMILY ALDH-like 6 486 IPR016161 GO:0016491
Aev01g2054 503 Pfam Aldehyde dehydrogenase family 23 485 IPR015590 GO:0016491
Aev01g2054 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Aev01g2054 503 CDD ALDH_F10_BADH 27 487 - -
Aev01g2054 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2054 Aev-Chr1 25147082 25150610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2054 1 501 Aldehyde Dehydrogenase Gene Family AT1G74920 83.633 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2054 K00130 - gmx:100170731 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2054 01 25147082 25150610 Aev01g2054 01 25147082 25150610 ECH
Aev01g2054 01 25147082 25150610 Aev08g2201 08 21207432 21219124 PCT