Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2036 ATGCACAACATTCCACAAGAACCCCAGCAGCAAAAAGGTGTTTTTGGAAATTTGAAGTACTCATCTCCATCTTCTTATGATGCTAATAACATAGTTAGCAGCAATAATGATCAAGAACCAACACTTGAATCATCTCTTAGCAGAATAAGCCCACTGATTCTGCTTGTTATAATAGTCCTAGCAGTAATCTTCTTTGTCTATGGACTTGTCCATTTGATTCTGTGGTTCATAATGAAAATGCCATCACCACCTTCATTCTCATCACTCTACAACTCCAACAGGTTCCATGAATCATCATCGACTCGAACCCGAGCACTTCAGAGGCAGCTTCAACAGCTATTCAGAATGCATGATTCAGGATTAGAGCAATCCCTCATAGATTCTCTCCCTCTCTTCTACTACCAACAATTGTTGGGTCTTAAGGAACCATTTGATTGTGCTGTGTGTTTGTGTGAGTTTTCTGATGATGATAAGCTTAGGCTTGTCCCTATTTGCAGCCATGCCTTTCACATGAATTGCCTTGACACATGGCTTCTATCAAACTCAACTTGCCCTCTATGCAGAGCAACAATCTCCTCAAGCTCCATGGACAATCATCATCCAATGCTCAGTGCTGAGAATTCTTGTGAGGAAGAGAGTAACAATAATAGTAATGTTTGTTCACAAGTCATTACTGAGGAGGAAGAACAAGGTTGTGGGAAAAGGGTGTTTTCTGTGAGGCTTGGGAAGTTCAGAAACAGTGATGTGAAGGGTGGTGGAGAAGTAGTAGAGAGTAGTAGTAGTGTTAGTTGTGGTTTTGATGTGAGAAGATGCTACTCCATGGGATCATATCAGTATGTGGTTCGTGATTCGAATCTGCAGGTGGTGTTATCTGAATCTCATGATTTGTGTGATGTTTCAGAAAATGGGGATTTGGATGGGAAGAAGATAGGGAATAGCAGAACAAAAGGTGAGAGCTTCTCTGTTTCCAAGATCTGGCTTTGGTCCAAGAAGAGCAGATATCATAATGCTGATTTCCCTTGA 1023 0.4115 MHNIPQEPQQQKGVFGNLKYSSPSSYDANNIVSSNNDQEPTLESSLSRISPLILLVIIVLAVIFFVYGLVHLILWFIMKMPSPPSFSSLYNSNRFHESSSTRTRALQRQLQQLFRMHDSGLEQSLIDSLPLFYYQQLLGLKEPFDCAVCLCEFSDDDKLRLVPICSHAFHMNCLDTWLLSNSTCPLCRATISSSSMDNHHPMLSAENSCEEESNNNSNVCSQVITEEEEQGCGKRVFSVRLGKFRNSDVKGGGEVVESSSSVSCGFDVRRCYSMGSYQYVVRDSNLQVVLSESHDLCDVSENGDLDGKKIGNSRTKGESFSVSKIWLWSKKSRYHNADFP* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2036 340 ProSiteProfiles Zinc finger RING-type profile. 146 188 IPR001841 -
Aev01g2036 340 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 14 340 - -
Aev01g2036 340 SMART ring_2 146 187 IPR001841 -
Aev01g2036 340 CDD RING-H2_PA-TM-RING 145 188 - -
Aev01g2036 340 Pfam Ring finger domain 145 188 IPR001841 -
Aev01g2036 340 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 14 340 - -
Aev01g2036 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 199 IPR013083 -
Aev01g2036 340 SUPERFAMILY RING/U-box 125 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2036 Aev-Chr1 25009093 25010115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2036 47 333 C3H Transcription Factor Family AT2G18650 42.121 9.93e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2036 - - gmx:100789990 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2036 01 25009093 25010115 Aev01g2036 01 25009093 25010115 ECH