Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2029 ATGACTCATCATCAAAGGGACCGCCGTGTCCTATCATTCCCGGCGGTGCACCCTTGCGAAGGGATATCTCCGGCGACTCTCATTTCCTCCCTAATCACACTCTCACACAACATATGCACCTACCAAAACACCACTTTCTTCTTCGCAACACAGAGAAGAAACGCAAGAGAAGCAATGCGCCAAGTTCACATAATCCTCATCTTCCTCCACGAAATCCAACACCGTTCATCACTCATCCCCGAATCCACCATCCTAACCTTCTCAGAGCTCCACTTCACCTTCCAGAAGCTTCTATTCTTGCTACAAGACTGTTCCCGCGAAGACGCGCGAATCTTGATGCTTGCGAAATCCCAACACGTGGCTTCCAACTTCCAGTCCCTGATTCGCGCCGTCGCAACCGTGCTCGACGTTCTTCTTCCTCTTCTTCTTCACAAAATCCAAGTTTGCCGCGAAGTGAAGGAGCTAGTGGAGCTGTTATCGAAGCAAGCGAGGAAAGCGAAACTAGAACACGATCCCAACGATGAGCTAGCGAGCAATAAGCTTCACTCTGTTTTGAAACAGTTCGAGAAAGGAATCGAACCTGACGCGAATGCATTGCGTGGAATCCTCGATTACCTGGAAATCAAAACATGGACGGAATGTAACAACGAAGTAAAGCTTTTGGAGAACGAAATCGGGTTCGAGTACAGCGAATCCAACGAGAAAGACGTTGCTCTGTTTAGTAGCTTGGTAGGGTTCATGAGTTACTGCAGAGTAGTGATATTCGAAACACTCGACTTCGACTTCACATTCCCTTTGCGTAGCGATCAATACTCTGAAGCGAGGTGTAGCACGGAAATGATCACGTGCGTGAATCCAGAGGATTTTCGGTGCCCAATTTCGCTGGAGCTAATGACGGATCCGGTGACGGTTTCAACGGGACAAACCTACGACAGAGCCTCCATCAAGAAATGGTTGAAAGCAGGAAACAGAATATGCCCCAAAACAGGGGAGAAGCTCCAAAACACTGACCTTGTTCCCAACACCACGCTCAAGAGGCTAATCCAACAGTTCTGCAACGACAACGCCATTTCTATCTCCAAATCCAGTAACCGTAGCCGCGACATAGCCAGAACAATTCAACCAGGAAGTTCGGCAAATGCTCATGCCGTGCAGTTCCTGTCATGGTTCCTAACACGGAGGCTCGTGTTTGGAACTGAGGAACAGAGAACTAAAGCGGCTTATGAGGTTCGGGTGCTCGCGAGATCCAACGTGTTCATCAGGGCGTGCTTGATTGAAGTTGGAATGGTCCCTCCTCTGTTAGATCTTTTGTCCAGTGATGATAAGTCGACGCAAGAGAACGCAATGTCTGCGTTGTTGAAGCTTTCAAAGCACGCCACTGGACCACAAAACATCATGGAAAGTGATGGCCTAACACCGATTCTTAATGTCCTCAAAAAAGGACTTAGCCTCGAAGCAAAACAAGTCGCAGCCGCCACAGTTTTCTACCTCTCTTCTGTGAAGGAATACAGGAAATTGATCGGAGAAAATCCCCAAGTGATTCCTTCTTTGGTGGAGTTGGTGAACGAGGGAACAACGTGCGGGAAGAAGAACGCTGTGGTTGCGATTTACGCTTTGATTTTGGTTCCTAAGAATCAGCGGAGGGCGCTAGAAGCGGGTGTTGTGCACGCGCTCGTTAATGTTCTGCGTTCTTCGGATAAAGACGAACTCGTAACTGAATGTTTGGGTGTTCTTGAGAAATTGGCGGAGAATGTTGAGGGAGCGCACGCGATATTGCGTGAATCGGAATCGGTGTTGTCGTTGGTGAGTGGGATGTTGCAAACGGCGTCGTCGCGTGCGGGGAAAGAGCACTCTGCTTCGATTCTGCTTTCGTTGTGCGTCAATGTTGGTGCAGAGGTTGTTGGTGTTTTGGCTAAGGATCCTTCGTTAATGCCTCTGCTTTATTCGCTTCTCACGGACGGTACTTCTCATGCGGCGAAGAAAGCGCGGTTCCTAATCAAAATTCTTCAGGATTTCAACGAAACCACAGCTTCTGGATTCAAAGGGTTTTTGAGATTTGAGGTTTATTCAATGGCGACCGAACCCAAACCAGCCTCCGAGGACGTCAAGATCGATCTCTTCGAAGACGACGACGAGTTTGAAGAGTTCGAAATCAACGAAGAGTGGGATGACAAGGAGGAAGGGAAAGAGGTGACTCAGCAGTGGGAAGATGATTGGGATGATGATGATGTTAGTGATGATTTCTCTCTTCAGCTTAGGAGGGAGCTTGAGAGCAATGCTGAGAAGAAATAA 2292 0.4834 MTHHQRDRRVLSFPAVHPCEGISPATLISSLITLSHNICTYQNTTFFFATQRRNAREAMRQVHIILIFLHEIQHRSSLIPESTILTFSELHFTFQKLLFLLQDCSREDARILMLAKSQHVASNFQSLIRAVATVLDVLLPLLLHKIQVCREVKELVELLSKQARKAKLEHDPNDELASNKLHSVLKQFEKGIEPDANALRGILDYLEIKTWTECNNEVKLLENEIGFEYSESNEKDVALFSSLVGFMSYCRVVIFETLDFDFTFPLRSDQYSEARCSTEMITCVNPEDFRCPISLELMTDPVTVSTGQTYDRASIKKWLKAGNRICPKTGEKLQNTDLVPNTTLKRLIQQFCNDNAISISKSSNRSRDIARTIQPGSSANAHAVQFLSWFLTRRLVFGTEEQRTKAAYEVRVLARSNVFIRACLIEVGMVPPLLDLLSSDDKSTQENAMSALLKLSKHATGPQNIMESDGLTPILNVLKKGLSLEAKQVAAATVFYLSSVKEYRKLIGENPQVIPSLVELVNEGTTCGKKNAVVAIYALILVPKNQRRALEAGVVHALVNVLRSSDKDELVTECLGVLEKLAENVEGAHAILRESESVLSLVSGMLQTASSRAGKEHSASILLSLCVNVGAEVVGVLAKDPSLMPLLYSLLTDGTSHAAKKARFLIKILQDFNETTASGFKGFLRFEVYSMATEPKPASEDVKIDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSLQLRRELESNAEKK* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2029 763 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 553 596 IPR000225 GO:0005515
Aev01g2029 763 PANTHER U BOX DOMAIN-CONTAINING 5 678 - -
Aev01g2029 763 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 285 358 IPR013083 -
Aev01g2029 763 SUPERFAMILY RING/U-box 281 357 - -
Aev01g2029 763 SUPERFAMILY ARM repeat 394 669 IPR016024 -
Aev01g2029 763 Pfam Armadillo/beta-catenin-like repeat 421 455 IPR000225 GO:0005515
Aev01g2029 763 PANTHER OS07G0532750 PROTEIN 5 678 - -
Aev01g2029 763 SMART Ubox_2 288 351 IPR003613 GO:0004842|GO:0016567
Aev01g2029 763 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 428 470 IPR000225 GO:0005515
Aev01g2029 763 MobiDBLite consensus disorder prediction 717 743 - -
Aev01g2029 763 SMART DSS1_SEM1_2 699 758 IPR007834 GO:0006406|GO:0008541|GO:0043248
Aev01g2029 763 Pfam DSS1/SEM1 family 701 757 IPR007834 GO:0006406|GO:0008541|GO:0043248
Aev01g2029 763 Gene3D - 359 682 IPR011989 -
Aev01g2029 763 Coils Coil 149 169 - -
Aev01g2029 763 ProSiteProfiles U-box domain profile. 284 358 IPR003613 GO:0004842|GO:0016567
Aev01g2029 763 CDD RING-Ubox_PUB 289 331 IPR045210 -
Aev01g2029 763 Pfam U-box domain 286 355 IPR003613 GO:0004842|GO:0016567
Aev01g2029 763 SMART arm_5 542 583 IPR000225 GO:0005515
Aev01g2029 763 SMART arm_5 417 457 IPR000225 GO:0005515
Aev01g2029 763 SMART arm_5 458 499 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2029 Aev-Chr1 24966950 24971110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2029 8 674 U-box Gene Family AT1G60190 37.463 7.00e-149 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2029 - - mtr:MTR_4g107010 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2029 01 24966950 24971110 Aev01g2029 01 24966950 24971110 ECH