Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2026 ATGACGAAGAAAACTCACACTAGCGGAGGCGATTCCTCGTCAAAACTTGACCGCAAAACAATCGAAAAGAACCGCAGAATTCACATGAAAGCTCTCTGCTTAAAGCTTTCATCCATCGTTCCTCCCAACTACATCAAACTCACCAAGGATATTCCATCACAGCTGGACCAGCTGGATGTTGCAACAGCGTACATAAAGGATCTGAGGGAAAGAATAAGCGCATTGGAGGCGAAGAAGGAGGAAGCCATGAACAAGACGACGGCGAGGTCAAGAAGAAATGAGGGAAGAAGCAGTTTAAAGAATAACAGGAACAATAAAAATGATGGTGTAAATGGGCCATCAGCATCGGAATTGGTGTTGCCGTTGGTTGAGATCAGAGACTTGGGATCGGACATAGAAGTGATGATGGTGAGTGGGTTGAACAACAAGAACTTCATGCTCTACGAAGTCATTGCTGTGCTTGAGGAAGAAGGCGCTGAAGTTGTCGCCGCTAACTACTCTCTTCTTCCCGATAAGATTTTCTACACTCTTCATGCACAGGTAAAACTATCAAGAGTTGGAGTAGACACAAGGAGGGTATATGAGAGGATTCAGGAGTTGATTGCACCAGTACTGGCTCCACTAAACTGGGACTTATTAGAAGAACCACACTATTATCAGCTACCTAGCTGTTCATGA 678 0.4469 MTKKTHTSGGDSSSKLDRKTIEKNRRIHMKALCLKLSSIVPPNYIKLTKDIPSQLDQLDVATAYIKDLRERISALEAKKEEAMNKTTARSRRNEGRSSLKNNRNNKNDGVNGPSASELVLPLVEIRDLGSDIEVMMVSGLNNKNFMLYEVIAVLEEEGAEVVAANYSLLPDKIFYTLHAQVKLSRVGVDTRRVYERIQELIAPVLAPLNWDLLEEPHYYQLPSCS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2026 225 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 6 200 IPR015660 GO:0003700|GO:0006357
Aev01g2026 225 MobiDBLite consensus disorder prediction 79 113 - -
Aev01g2026 225 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 81 IPR036638 GO:0046983
Aev01g2026 225 Coils Coil 58 85 - -
Aev01g2026 225 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 68 IPR011598 GO:0046983
Aev01g2026 225 PANTHER OS01G0108400 PROTEIN 6 200 - -
Aev01g2026 225 Gene3D - 5 98 IPR036638 GO:0046983
Aev01g2026 225 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2026 Aev-Chr1 24942110 24943461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2026 5 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 34.328 1.60e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev01g2026 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2026 - - gmx:100811485 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2026 01 24942110 24943461 Aev08g2244 08 21594560 21597027 PCT