Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2008 ATGGGAAGAAAAAAGACCGAGGATGGAGCCCCATCTGCAAAGGCTAAGGCTAGTGGAAAAGATGGTCCTAAGAAGGAAAAGATTTCTGTCTCTGCTATGTTGGCCAGTATGGATGAAAAGCCTGATAAACCCAAGAAAGTCCCTTCCTCCAGTAAACCCAAGGCAAAAGCTGCTCCAAAACCTTCGGCATACACTGATGGTATTGATCTTCCTCCATCTGATGAGGAAGATGAAGATCTATTGGAAGAGGAGCAAGAGAAGAATAATGCGTCCAGGCGGTCCAGTCAGCAGCAGAAGCCTGATTTGAAGCCAATTGAAGTATCTACCACAGACAAAGAGTTAAAAAAGCGTGAAAAGAAGGATTTTTTAGCAGCTCAAGCTGCTGAGCTGGCAAAGAAAGAAGCTCTCAAGGATGATCATGATGCTTTCACTGTGGTCATTGGAAGCCGAAGTTCAGTGCTTGATGGAGAAGATGATGCTGATGCTAATGTGAAAGATATAACAATAGAGAACTTTTCTGTGTCTGCTCGGGGCAAGGAACTTCTGAAGAATGCATCGGTGAAGATATCTCATGGGAAGAGGTATGGTTTGGTCGGGCCCAATGGAAAGGGCAAGTCAACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCAGTACCTAAGAATATTGATGTCCTTCTGGTTGAACAGGAGGTGGTTGGTGATGATAAAACAGCACTTGAAGCTGTTGTTTCAGCTAATGAAGAGCTAGTTAAGATTCGACAAGAAGTTGCTTGTCTGCAAAATGCAACCTGTGCTGAAGATATTGTGGACAAAGATAATAATTATGAGGAAGACGATGCAGGAGAGAAGCTTGCAGAGCTGTATGAAAAACTACAGCTGATGGGGTCTGATGCGGCTGAAGCTCAGGCATCAAAGATTTTAGCTGGTCTCGGTTTTACAAAGGATATGCAGGGCCGCCCTACAAAATCCTTTAGTGGTGGATGGAGGATGAGGATTTCTTTAGCTCGAGCACTTTTTGTGCAGCCAACGCTATTATTGCTTGATGAACCCACCAATCATCTTGACCTGAGGGCTGTTCTCTGGTTGGAAGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTTGTCTCCCACGATAGGGATTTCCTCAATACTGTTTGCACTGAGATTATTCATCTGCATGATTTGAAACTCTATGTCTATCGTGGAAATTTTGATGACTTTGAGAGTGGGTATGAGCAGCGTCGTAAAGAGATGAATAAGAAGTATGAGATTTATGACAAGCAATTAAAGCTGCTAAAAGGAGTGGAAACCGAGCTCAGCAAGAAAAGGTGA 1338 0.4365 MGRKKTEDGAPSAKAKASGKDGPKKEKISVSAMLASMDEKPDKPKKVPSSSKPKAKAAPKPSAYTDGIDLPPSDEEDEDLLEEEQEKNNASRRSSQQQKPDLKPIEVSTTDKELKKREKKDFLAAQAAELAKKEALKDDHDAFTVVIGSRSSVLDGEDDADANVKDITIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKIRQEVACLQNATCAEDIVDKDNNYEEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDLKLYVYRGNFDDFESGYEQRRKEMNKKYEIYDKQLKLLKGVETELSKKR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2008 445 Coils Coil 73 93 - -
Aev01g2008 445 MobiDBLite consensus disorder prediction 1 116 - -
Aev01g2008 445 CDD ABCF_EF-3 167 398 - -
Aev01g2008 445 Coils Coil 243 263 - -
Aev01g2008 445 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 167 428 IPR003439 GO:0005524
Aev01g2008 445 ProSitePatterns ABC transporters family signature. 325 339 IPR017871 GO:0005524
Aev01g2008 445 Pfam ABC transporter 182 353 IPR003439 GO:0005524
Aev01g2008 445 Gene3D - 164 445 IPR027417 -
Aev01g2008 445 PANTHER - 8 436 - -
Aev01g2008 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 407 IPR027417 -
Aev01g2008 445 MobiDBLite consensus disorder prediction 70 84 - -
Aev01g2008 445 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 8 436 - -
Aev01g2008 445 SMART AAA_5 191 397 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2008 Aev-Chr1 24805861 24807198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2008 180 379 Calmodulin-binding Proteins AT2G36910 29.268 1.45e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2008 K06184 - gmx:100806865 675.241