Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2007 ATGAAAGATGATGATGATCATCATCACCTTCCTAATAATCCTTTTGTGGATCCTTCTTCTCATGGTTTCATGCAAGATTTTCACAACAATAATGGTCACCACTTTCACAATGTGAATGGCTCCTCATCAGATAATCCTAATTTGGGGGTCCAAAATGCAAATATTGATCCTTTTGGGAGTTTGGATGTTTATGAATGCAAGCATTTTGTTGAGAATGATGATGGTACTAATAATGGAGTGAGGCATGCTAATGTTATGGACAATTTCCAATATGAAGGTTATAGTAATAGTTTGAACCTCACTAGGAAAAACCAAATGGATCATATTCATCATCATCATCATATGATGGTTCCAAATAACCAAAGCTATTTGCCCTTTAATCCTCTTGAAACAAAGTCTTTGAATTTTGTTGCACCAGGTGAAATCTCATGCATATGTCCATCAAATTACTACAAAAGAGATGGCATGGAGATTAAAGATGATAACACTAGGGAATCTCCAACCACTAGAAGGACATTTAAAGCTAGGAAGAAATCCAACATGGTGAAAGGGCAATGGACAATTGAAGAAGATAGATTGTTGATTCAGCTAGTGGAACAATATGGAGTGAGGAAGTGGGCCCACATTGCTCAAGCTTTGCCTGGAAGAATAGGGAAACAGTGCAGAGAGCGATGGCATAATCATCTAAGACCTGATATTAAGAAGGACATATGGACAGAAGAAGAGGATAAGATACTGATCCAATCTCATTCAGAGTTAGGAAACAAATGGGCAGAGATAGCAAAAAGGTTAGCAGGAAGAACAGAGAACTCAATCAAGAACCACTGGAATGCAACAAAGAGGAGGCAACATTCAAAAAGGAAATGCAGATCAAAGTACCCTAGAGCCTCTCTTCTGCAGGAATACATCAAGAGCTTGAACCTGGACCAGAATCCACCAACAGATTACAGAAAAAGATCTTCTGCTAATACTAAGTCCATGGCATCAGCATCTAATTCCAATGACAGATTGGTGCCAAGTTATGATTTTAATGAGGTCCCAGAACTGTGTTTTGATGATAATCTGTTTATTCAAGAAGGGTGTGGTATTGATTCTCTGCTAGATGATGTTCCTTGTGCTCCCACAATAATGGATGACAAAGATTTCAATGGAAAGATGATGGCACCAATTTTGGGGGTTGATGTTAAGACAGAAGGAGCTGCTGGATTTGATTGA 1215 0.3852 MKDDDDHHHLPNNPFVDPSSHGFMQDFHNNNGHHFHNVNGSSSDNPNLGVQNANIDPFGSLDVYECKHFVENDDGTNNGVRHANVMDNFQYEGYSNSLNLTRKNQMDHIHHHHHMMVPNNQSYLPFNPLETKSLNFVAPGEISCICPSNYYKRDGMEIKDDNTRESPTTRRTFKARKKSNMVKGQWTIEEDRLLIQLVEQYGVRKWAHIAQALPGRIGKQCRERWHNHLRPDIKKDIWTEEEDKILIQSHSELGNKWAEIAKRLAGRTENSIKNHWNATKRRQHSKRKCRSKYPRASLLQEYIKSLNLDQNPPTDYRKRSSANTKSMASASNSNDRLVPSYDFNEVPELCFDDNLFIQEGCGIDSLLDDVPCAPTIMDDKDFNGKMMAPILGVDVKTEGAAGFD* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2007 404 CDD SANT 186 229 IPR001005 -
Aev01g2007 404 ProSiteProfiles Myb-like domain profile. 178 229 IPR001005 -
Aev01g2007 404 Pfam Myb-like DNA-binding domain 183 229 IPR001005 -
Aev01g2007 404 Pfam Myb-like DNA-binding domain 238 277 IPR001005 -
Aev01g2007 404 Gene3D - 236 302 - -
Aev01g2007 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 234 284 IPR017930 -
Aev01g2007 404 MobiDBLite consensus disorder prediction 23 51 - -
Aev01g2007 404 CDD SANT 238 280 IPR001005 -
Aev01g2007 404 ProSiteProfiles Myb-like domain profile. 230 280 IPR001005 -
Aev01g2007 404 MobiDBLite consensus disorder prediction 271 292 - -
Aev01g2007 404 MobiDBLite consensus disorder prediction 1 51 - -
Aev01g2007 404 SUPERFAMILY Homeodomain-like 180 276 IPR009057 -
Aev01g2007 404 MobiDBLite consensus disorder prediction 277 292 - -
Aev01g2007 404 Gene3D - 182 235 - -
Aev01g2007 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 178 233 IPR017930 -
Aev01g2007 404 SMART sant 234 282 IPR001005 -
Aev01g2007 404 SMART sant 182 231 IPR001005 -
Aev01g2007 404 MobiDBLite consensus disorder prediction 308 334 - -
Aev01g2007 404 PANTHER MYB PROTEIN-RELATED 100 336 - -
Aev01g2007 404 PANTHER BNAC07G50190D PROTEIN 100 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2007 Aev-Chr1 24801384 24803336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2007 84 371 MYB Transcription Factor Family AT4G18770 50.456 1.70e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev01g2007 Myb_DNA-binding 4.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2007 K09422 - gmx:100816653 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2264 08 21850555 21852944 Aev01g2007 01 24801384 24803336 PCT