Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1984 ATGGCATCATCCAGCTCTTACAATTCTCCCTGCGCTGCCTGCAAATTCTTAAGGAGGAAATGCATGCCAGGGTGCATCTTTGCTCCGTACTTCCCACCTGAAGAGCCTCAGAAGTTCGCCAACGTTCACAAGATCTTCGGCGCCAGCAATGTCACCAAGCTTCTCAACGAGCTCCTGCCTCACCAGAGGGAGGACGCTGTTAACTCCCTCGCATATGAGGCAGAGGCTCGTGTGAGGGACCCAGTGTATGGCTGTGTTGGCGCCATCTCATTCCTTCAGAGACAGGTCCAGAGGTTGCAGAAGGAACTCGATGCCGCCAACGCAGATCTCATCCGATACTCTTTTGTTGGTGACATCGTCACTCCTTCTGCAACGACTCTCTCTGTCATCCCTCCTGCAATACTCACAAACTCACTTCAACAAATTCCACAGAGACAATATAGTGCAAGAGTTGGTAACGATGGAGGCCCGCTTTATCATCGTCATCAATCTCCTACAGCTGCTTATGCTTTCCCTTATTCTCTTCCTTGGACTGATGTCTCTTGTGACGATATCAGTGAAGGAGGAGGTCTTGGAGGAGGAGGTAATAATTTGTGA 597 0.5008 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYSFVGDIVTPSATTLSVIPPAILTNSLQQIPQRQYSARVGNDGGPLYHRHQSPTAAYAFPYSLPWTDVSCDDISEGGGLGGGGNNL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1984 198 Coils Coil 89 109 - -
Aev01g1984 198 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Aev01g1984 198 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Aev01g1984 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 189 - -
Aev01g1984 198 PANTHER ELONGATED PETIOLULE 1 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1984 Aev-Chr1 24580232 24580828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1984 1 115 AS2 family AT5G63090 93.103 3.36e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev01g1984 LOB 3.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1984 - - gmx:100803667 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1984 01 24580232 24580828 Aev01g1984 01 24580232 24580828 ECH
Aev01g1984 01 24580232 24580828 Aev08g2286 08 22108236 22108850 PCT