Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1977 ATGACGACGAGGTTCAAGAAGAACAGGAAGAAGAGAGGCCACGTCAGCGCCGGCCACGGCCGTATCGGCAAGCACCGCAAGCACCCCGGTGGTCGCGGTAACGCCGGTGGCATGCACCACCACCGCATCCTCTTCGACAAGTACCATCCGGGTTACTTCGGTAAGGTCGGTATGCGGTACTTCCACAAGCTCCGCAACAAGTTCCATTGCCCCATCGTCAACATCGACAAGCTCTGGTCTTTGGTCCCACAAGAGATCAAGGACAAGGCTTCCAAGGACAACAAGGCACCCTTGATCGACGTTTCCCAGTTCGGGTACTTTAAGGTTTTGGGAAAGGGGGTTTTGCCTCAGAACCAGCCTGTGGTCGTGAAGGCCAAGCTTGTGTCGAAGATTGCCGAGAAGAAGATCAAGGAGGCTGGTGGAGCTGTTGTTCTCACCGCTTGA 444 0.5563 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFHCPIVNIDKLWSLVPQEIKDKASKDNKAPLIDVSQFGYFKVLGKGVLPQNQPVVVKAKLVSKIAEKKIKEAGGAVVLTA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1977 147 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 IPR021131 -
Aev01g1977 147 MobiDBLite consensus disorder prediction 1 35 - -
Aev01g1977 147 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 147 - -
Aev01g1977 147 SUPERFAMILY Ribosomal proteins L15p and L18e 6 146 IPR036227 -
Aev01g1977 147 PANTHER 60S RIBOSOMAL PROTEIN L27A-3 1 147 - -
Aev01g1977 147 Gene3D - 58 147 - -
Aev01g1977 147 ProSitePatterns Ribosomal protein L15 signature. 108 140 IPR001196 GO:0003735|GO:0005840|GO:0006412
Aev01g1977 147 Hamap 50S ribosomal protein L15 [rplO]. 1 146 IPR030878 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1977 Aev-Chr1 24508301 24508744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1977 1 147 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 87.075 3.14e-92 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1977 K02900 - gmx:100802235 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1977 01 24508301 24508744 Aev08g2298 08 22234683 22235129 PCT