Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1976 ATGACGACAAGGTTCAAGAAGAACAGGAAGAAGAGAGGCCACGTCAGCGCCGGCCACGGCCGTATCGGCAAGCACCGCAAGCATCCCGGTGGTCGCGGTAACGCCGGTGGCATGCACCACCACCGCATCCTCTTCGACAAGTACCATCCGGGTTACTTCGGTAAGGTCGGTATGCGTTACTTCCACAAGCTCCGCAACAAGTTCCATTGCCCCATCGTCAACATCGACAAGCTCTGGTCTTTGGTCCCACAAGAGATCAAGGACAAGGCTTCCAAGGACAGCAAGGTACCCTTGATCGACGTTTCCCAGTTCGGCTACTTTAAGGTTTTGGGGAAGGGAGTTTTGCCTCAGAACCAGCCCGTGGTTGTGAAGGCCAAGCTTGTGTCGAAGATTGCCGAGAAGAAGATCAAGGAGGCTGGTGGAGCTGTTGTTCTCACCGCTTGA 444 0.5495 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFHCPIVNIDKLWSLVPQEIKDKASKDSKVPLIDVSQFGYFKVLGKGVLPQNQPVVVKAKLVSKIAEKKIKEAGGAVVLTA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1976 147 Gene3D - 58 147 - -
Aev01g1976 147 MobiDBLite consensus disorder prediction 1 35 - -
Aev01g1976 147 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 147 - -
Aev01g1976 147 Hamap 50S ribosomal protein L15 [rplO]. 1 146 IPR030878 GO:0003735|GO:0006412|GO:0015934
Aev01g1976 147 SUPERFAMILY Ribosomal proteins L15p and L18e 6 146 IPR036227 -
Aev01g1976 147 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 IPR021131 -
Aev01g1976 147 ProSitePatterns Ribosomal protein L15 signature. 108 140 IPR001196 GO:0003735|GO:0005840|GO:0006412
Aev01g1976 147 PANTHER 60S RIBOSOMAL PROTEIN L27A-3 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1976 Aev-Chr1 24503946 24504389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1976 1 147 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 87.075 3.90e-92 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1976 K02900 - mnt:21383734 292.737