Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1945 ATGGGCCTCCAAACCATACCCATCGACGACCTCCAGAGCACCCGGATCTTACCCGAACCCGATGTCTTCATTCACACTTCCGATGGAACACGCATTCCCGCACACGCCACCATTCTGGCTTCGGTGTCGCCGGTCTTGGAGAACAACATAGACCGACCACGCAAACATCGGAGCTCCCAAAAAATCATCCAGATTCACGGCGTTCCGTCTGACGCCGTCACCGCCTTCGTCGATTTCATCTACACCTTGAGGTGCAGGGAGGAGAAGATAGACAAGTACGGGATGCATTTGCTGGCATTGTCGCACGTGTACATGGTGCCGCAGCTGAAGCAGAGGTGCACCAAGGGGCTGTCGCAGCGCGTGTCCACCGAAAACGTGGTGGACTTGCTTCAACTGGCGCGTCTCTGCGACGCGCCGGATCTCTACCTCAAATGCATGAGGCTCCTCACTGATCATTTCAAAGCCGTCGAGAAAACAGAGGGCTGGAAGTTCCTCAACAAGCACGATCCCTGGCTTGAACTCGATATCCTTCGCTTCATCGACGAACACGAAACGAGGAAAGAGAAATCGAGGAGGCACAGAGAGGAACAGAGGGTGTATAGAGAGCTAAGCGAGGCGATGGAGTGTTTGGAACACATATGCACGGAAGGGTGCACCGAAGTTGGACCCTATGACGTGGACGCCAGGAGAGAGAAGAGGCCGTGTAACAGATTCGCCACGTGTCAGGGTCTCCAGCAATTGATCCGCCACTTCGCCACGTGTCACAAGAGGATGAACCGAGGGTGCTTGCGGTGCAAGCGAATGTGGCAGCTCTTTAGGCTTCATTCCTACATTTGTCAGCAAACTCATTCCTGCAAGGTTCCTCTTTGCAGGCAAATTCAATTGAAAATGCAGCAAGAGAAGAGGAAAGATGATGCAAGGTGGAAACTGCTAGCGAGGAAAGTGGCCTCAGCCAGAGTCATTTCCTCATTGTCTCTGCCAAAGAGGAAGAGAAATGATGAAATTAGAGTACCTATAGACAATTCTGATATCAGAACTTTTGAACTGCATTGA 1053 0.5204 MGLQTIPIDDLQSTRILPEPDVFIHTSDGTRIPAHATILASVSPVLENNIDRPRKHRSSQKIIQIHGVPSDAVTAFVDFIYTLRCREEKIDKYGMHLLALSHVYMVPQLKQRCTKGLSQRVSTENVVDLLQLARLCDAPDLYLKCMRLLTDHFKAVEKTEGWKFLNKHDPWLELDILRFIDEHETRKEKSRRHREEQRVYRELSEAMECLEHICTEGCTEVGPYDVDARREKRPCNRFATCQGLQQLIRHFATCHKRMNRGCLRCKRMWQLFRLHSYICQQTHSCKVPLCRQIQLKMQQEKRKDDARWKLLARKVASARVISSLSLPKRKRNDEIRVPIDNSDIRTFELH* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1945 350 SMART BTB_4 20 121 IPR000210 GO:0005515
Aev01g1945 350 CDD BACK 122 169 - -
Aev01g1945 350 Gene3D Potassium Channel Kv1.1; Chain A 11 122 IPR011333 -
Aev01g1945 350 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 3 348 IPR044513 -
Aev01g1945 350 Pfam TAZ zinc finger 204 290 IPR000197 -
Aev01g1945 350 Gene3D TAZ domain 193 325 IPR035898 -
Aev01g1945 350 Gene3D - 123 192 - -
Aev01g1945 350 ProSiteProfiles BTB domain profile. 20 89 IPR000210 GO:0005515
Aev01g1945 350 SUPERFAMILY POZ domain 21 151 IPR011333 -
Aev01g1945 350 Pfam BTB/POZ domain 20 119 IPR000210 GO:0005515
Aev01g1945 350 SMART TAZ_2 197 291 IPR000197 -
Aev01g1945 350 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 3 348 - -
Aev01g1945 350 SUPERFAMILY TAZ domain 195 294 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1945 Aev-Chr1 24321238 24325950 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Aev01g1945 BTB 8.3e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1945 - - cam:101496955 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1945 01 24321238 24325950 Aev01g1945 01 24321238 24325950 ECH
Aev01g1945 01 24321238 24325950 Aev08g2347 08 22569934 22571109 PCT