Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1936 ATGGGTCCTCAATGTGCTCCTTCTGAGTCCCCCACTTCCCATCACAATCCTGAGCCGTCATATCTCGATCAAACGGCCCAGGATGGTGAGCTATGTGGTGAGCTTCAGAGCAAGTTGGATTTGAAGGGTGAGAGTGAAGAGGGTGGTGAAACTGCTGATAAAGTTTCGAACTTTACCGAAGTCGGTGATGAAGGTGTTAAGGGTCATGATGATGGTGTTAATGGTGGTGGTGCTGGCGATGATGATGGTGTTAAGACTGATGGTGCTGTAAAGGGTGATGATGTAGGTGTTAAGGCTGGTAATTTTGTCGGTGTTAAGGGTGATGATGGAGGTCTTAACTGTGGTGATGAAGGTATTAAGGGTGATGATGTGGGTGTTAACGGTGGTGATGAAGGTATTAAGGGTGATGATGTGGGTGTTAATGGTGATGATGAAGGTATAAAGGGTGGTGATGAAGGTCTCAAGGGTGGTGCTGAAAGTGTTAATGGTGGTGATGAAAGTATTAAGGGGGATGATGAAGGTGTAAGGGGTGGTGATGTAGGTGTAAAGGGCGGTGATGAAGATGGTAATGGGTATGATGAAGGGGTAAAGGGTGATGATGAAGTTGGGGCTCTTAATGACTATGAAGAGGGTGTTAAAGGTGGGTATGGTGATGGGGATAGTAGGGGTTGGGAGATCAATAGCTGGGATGAGAATGTGATTGAGGGTGATGTGAATGCTGATTATGGAGTTGGTGGTGATGTTTATGGCAGCTTGGAAGATGGTGATAGTGATGGTGATGGAGTTGAAAAGGGGGAAGAGAGAAGTGTTGGTGGTAGGACCCATCAGTACCCTTGGAGGCCTGAAGCTCAGGATTGTGCATTCTATATGAAGACTGGAACTTGCAAATATGGTCTCAATTGCAAGTTCAACCACCCCATTAAAAGGAAAAACCAGACTGTTAAGGAGTTGGCAGGGGAAAGAGACGAACCACCAGAAAGACCAGGCCAGACAGAATGCAAGTATTATCTAAGGTCTGGGGGCTGTAAGTTCGGAAAGGATTGTAAATATAACCACACTAGAGCAAAAGATTCAACACCACAAATAGCAGAACTTAACTTTCTTGGTCTGCCTATTCGTCTGGGAAAGAGAGAGTGTCCTTATTACATGCGAAATGGCTCTTGCAAGTTTGGAGCGAACTGCAAGTTTAATCATCCTGACCCTACAACTGTTGGGGGATGTGATCCTTCTTCAGGGTATGGTAATGGTGGGTCTATTTCATTACATGGTGTATCCAAACAGTCTGTCTCGTCATGGTCTTCTTCTAGAACAATGAACAAAACACCTCCTTTTGTGCCAATGATGCTTTCACCTAATCAAGGAGTTTCTTCCCAAGGTTCTGATTGGAATGGATATCAGGCACCGTCTGTTTACCTACCTGAGAGGAGTATCCATCCGCCTGCTCCATATGTCATGAACAACCCAACAATTGAAACAAATGCTTATATGCACCAGCAAAAGCAAATGCAAGTTGACGAGTTTCCCGAAAGGCCCGGTGAACCTGAATGCAGCTACTTCCTTAAAACTGGGGATTGCAAGTTCAAATCCAACTGTAAATTTCACCATCCAAAGAATCAGGTTGCTAAGTTGCCTCCATGCAACCTCAATGACAAGGGCTTGCCTCTAAGACCCGATAAGAATCCCTGCTCCCATTACACTCGATACGGAATTTGCAAATTCGGACCGGCTTGTAAGTATGACCACCCAAACTCGTTGCCCTCGCTTGATCAACAATCCTACACAGACTTAACTAATGGGGTGATGGGTGGAAATAGAGATCCAAGTAATCCAACACATTAA 1839 0.4513 MGPQCAPSESPTSHHNPEPSYLDQTAQDGELCGELQSKLDLKGESEEGGETADKVSNFTEVGDEGVKGHDDGVNGGGAGDDDGVKTDGAVKGDDVGVKAGNFVGVKGDDGGLNCGDEGIKGDDVGVNGGDEGIKGDDVGVNGDDEGIKGGDEGLKGGAESVNGGDESIKGDDEGVRGGDVGVKGGDEDGNGYDEGVKGDDEVGALNDYEEGVKGGYGDGDSRGWEINSWDENVIEGDVNADYGVGGDVYGSLEDGDSDGDGVEKGEERSVGGRTHQYPWRPEAQDCAFYMKTGTCKYGLNCKFNHPIKRKNQTVKELAGERDEPPERPGQTECKYYLRSGGCKFGKDCKYNHTRAKDSTPQIAELNFLGLPIRLGKRECPYYMRNGSCKFGANCKFNHPDPTTVGGCDPSSGYGNGGSISLHGVSKQSVSSWSSSRTMNKTPPFVPMMLSPNQGVSSQGSDWNGYQAPSVYLPERSIHPPAPYVMNNPTIETNAYMHQQKQMQVDEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNQVAKLPPCNLNDKGLPLRPDKNPCSHYTRYGICKFGPACKYDHPNSLPSLDQQSYTDLTNGVMGGNRDPSNPTH* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1936 612 MobiDBLite consensus disorder prediction 35 53 - -
Aev01g1936 612 MobiDBLite consensus disorder prediction 257 273 - -
Aev01g1936 612 PANTHER PROTEIN PHOSPHATASE RELATED 3 598 - -
Aev01g1936 612 Gene3D - 259 318 - -
Aev01g1936 612 MobiDBLite consensus disorder prediction 1 202 - -
Aev01g1936 612 ProSiteProfiles Zinc finger C3H1-type profile. 510 538 IPR000571 GO:0046872
Aev01g1936 612 SMART c3hfinal6 280 307 IPR000571 GO:0046872
Aev01g1936 612 SMART c3hfinal6 510 537 IPR000571 GO:0046872
Aev01g1936 612 SMART c3hfinal6 373 400 IPR000571 GO:0046872
Aev01g1936 612 SMART c3hfinal6 327 354 IPR000571 GO:0046872
Aev01g1936 612 SMART c3hfinal6 557 583 IPR000571 GO:0046872
Aev01g1936 612 ProSiteProfiles Zinc finger C3H1-type profile. 280 308 IPR000571 GO:0046872
Aev01g1936 612 SUPERFAMILY CCCH zinc finger 278 309 IPR036855 GO:0046872
Aev01g1936 612 MobiDBLite consensus disorder prediction 165 202 - -
Aev01g1936 612 MobiDBLite consensus disorder prediction 1 23 - -
Aev01g1936 612 MobiDBLite consensus disorder prediction 593 612 - -
Aev01g1936 612 PANTHER TRANSCRIPTION FACTOR C3H FAMILY-RELATED 3 598 - -
Aev01g1936 612 SUPERFAMILY CCCH zinc finger 374 400 IPR036855 GO:0046872
Aev01g1936 612 SUPERFAMILY CCCH zinc finger 515 540 IPR036855 GO:0046872
Aev01g1936 612 Gene3D - 323 406 - -
Aev01g1936 612 Gene3D - 509 595 - -
Aev01g1936 612 SUPERFAMILY CCCH zinc finger 558 583 IPR036855 GO:0046872
Aev01g1936 612 SUPERFAMILY CCCH zinc finger 330 355 IPR036855 GO:0046872
Aev01g1936 612 ProSiteProfiles Zinc finger C3H1-type profile. 327 355 IPR000571 GO:0046872
Aev01g1936 612 MobiDBLite consensus disorder prediction 123 152 - -
Aev01g1936 612 ProSiteProfiles Zinc finger C3H1-type profile. 556 584 IPR000571 GO:0046872
Aev01g1936 612 MobiDBLite consensus disorder prediction 251 276 - -
Aev01g1936 612 ProSiteProfiles Zinc finger C3H1-type profile. 373 401 IPR000571 GO:0046872
Aev01g1936 612 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 376 399 IPR000571 GO:0046872
Aev01g1936 612 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 512 537 IPR000571 GO:0046872
Aev01g1936 612 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 329 352 IPR000571 GO:0046872
Aev01g1936 612 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 559 582 IPR000571 GO:0046872
Aev01g1936 612 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 285 306 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1936 Aev-Chr1 24240864 24244494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1936 506 609 C2H2 Transcription Factor Family AT3G02830 43.750 2.35e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev01g1936 zf-CCCH 6.4e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1936 - - gmx:100786894 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1936 01 24240864 24244494 Aev08g2359 08 22662833 22665437 PCT