Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1934 ATGGCTCTTCTCCTAGACAACAATAGTAATAACAGTGAAGGCATATTACTCTGTCTGGAGACACATAATAACAAAGCAGTGCCAACACCGTTCCTCACAAAGACATACGAATTGGTGGATGATCCCAACACTGACCACATAGTCTCATGGGGCGAAGACCACGCCACCTTTGTGGTTTGGAGACCACCGGAGTTCGCTAGGGATCTTCTTCCTAACTATTTCAATGCTTTTATTTGGTATATAGCAATTCTTTTCGTTGGACTCTGTTTTAGTTGGATTGCAGCAATCCTTTTAGTTGGATTGTAA 306 0.4216 MALLLDNNSNNSEGILLCLETHNNKAVPTPFLTKTYELVDDPNTDHIVSWGEDHATFVVWRPPEFARDLLPNYFNAFIWYIAILFVGLCFSWIAAILLVGL* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1934 101 Gene3D - 22 78 IPR036388 -
Aev01g1934 101 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 23 75 IPR027725 -
Aev01g1934 101 Pfam HSF-type DNA-binding 31 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev01g1934 101 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-4D 23 75 - -
Aev01g1934 101 SUPERFAMILY "Winged helix" DNA-binding domain 28 75 IPR036390 -
Aev01g1934 101 SMART hsfneu3 27 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1934 Aev-Chr1 24235430 24235735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1934 1 74 HSF AT1G46264 63.291 5.74e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev01g1934 HSF_DNA-bind 9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1934 K09419 - psom:113286247 119.783