Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1931 ATGCTTGATGAATCACCCTCTTTTCAAGACTCTCTCCATGCACTTGAAGCTGATATTCAACATGCCAATGCCCTTGCTGCTTCTATTACAAAGGGCAAGGGCAAGGCTTGCCTTCAAATGAAGTTAGCATACAATAAATTGGCACCAATTTTTTTGTCTTTATTTCAATGGATGGAATGTGCATGTCCATGTCTACTTTCAAGTCATTTGGATCTTTTCCATATAATTGTGTATAAGGTTCCCATCAATGGGCACCCCAATATCTTTTCTTGTGGAAGGAAAGCAACTATAAAGGAGTTCTACAGTGTTATATTACCTTCTCTCCAGCACCTTCAGGGTCATTTAGTAGATTCTGACATTAAAACTCAAGAAAAAGAACACAACATTCAGATGGTAATCAATAGTAGTAGTGTTGATGAAGATAAGATGAAGCTTCATGATTTTGATATGGACAGAGAAAATGAATGTGGCATCTGCTTAGAGTCTTGTACAAAGATGGTTTTGCCTAATTGCTGTCATGCAATGTGTATAAATTGCTACAATGACTGGAACACAAGGTCAGAATCTTGTCCATTTTGTAGGGGAAGTTTGAAGAGAGTTAAGTCAGGGGATTTGTGGGTTCTAACATGCAGTAATGATGTGGTTGATGTGAAAACTATATACAGAGAAGATATATTGCGCCTTTTTCTCTTTGTAAATAACCTTCCTGAATATATCCCAGATGCTCTTTCCTTGATGTATTATGAGTACTTAATTTAG 759 0.3689 MLDESPSFQDSLHALEADIQHANALAASITKGKGKACLQMKLAYNKLAPIFLSLFQWMECACPCLLSSHLDLFHIIVYKVPINGHPNIFSCGRKATIKEFYSVILPSLQHLQGHLVDSDIKTQEKEHNIQMVINSSSVDEDKMKLHDFDMDRENECGICLESCTKMVLPNCCHAMCINCYNDWNTRSESCPFCRGSLKRVKSGDLWVLTCSNDVVDVKTIYREDILRLFLFVNNLPEYIPDALSLMYYEYLI* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1931 252 SUPERFAMILY RING/U-box 142 199 - -
Aev01g1931 252 ProSitePatterns Zinc finger RING-type signature. 171 180 IPR017907 -
Aev01g1931 252 PANTHER OS01G0905700 PROTEIN 5 252 - -
Aev01g1931 252 ProSiteProfiles Zinc finger RING-type profile. 156 194 IPR001841 -
Aev01g1931 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 203 IPR013083 -
Aev01g1931 252 Pfam Ring finger domain 154 194 IPR001841 -
Aev01g1931 252 PANTHER RING FINGER PROTEIN 41, 151 5 252 - -
Aev01g1931 252 SMART ring_2 156 193 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1931 Aev-Chr1 24222167 24224432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1931 145 227 RAD5 or RAD16-like Gene Family AT5G43530 34.118 3.69e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1931 - - jre:109018365 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1931 01 24222167 24224432 Aev01g1931 01 24222167 24224432 ECH