Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1920 ATGTCCCCAGTGCTTTATAGTGCCTTCAATGGCGAATTCGATGATGAGAGTCCCATAATTGGCCATGACCCCTCTTCCATCACTCACTATCCATATTCCCTTTGGCCCATTTTGGAAAGCAGTGCTTCAAATTGCTTCTTTCCCATTTCAGATGAAACCTGCAGAGATAACAAGAGGCATAAGATTAACACAAACACAAGCATTCCCATTTTCCTTGGAAGCTATAGCACAAATAATTGCTATGGTTATCTAAGAAATGGGAGTGGCACGAACATCGCGAATTCCTTGCCAAGGCCTCACATGAGAGACCACATAAAGAGGTACCTTGCTGCCAAAGCTGTTGATGAAGCAGCAGAGGACATGATCAATTCCGAATGTGGTGGTGGAGTTTCTAATGAAGAAGATGGTTGTGCTGATGGAATGATCAGGCTTGTTCAGCTTCTGATTGCTTGTGCTGAAGCTGTGGCTTGCCGTGACAAGTCACACGCTTCGACCTTGCTATCGGAGTTGAAATCCGATGCTCTGGTGTTTGGTTCGTCGTTCCAGCGTGTAGCCTCTTGTTTTGTGCAAGGATTAGCTGATAGGCTTGCTCTGATTCAACCTGCAGTTGGGCCTGTTATTGGGGTGGTGCAACCAATGATGAACATAATGGATTCAGCATCGGAGAAGATGGAAGAAGCTTATAGGTTGGTCTATGACATATGCCCACATATTCAATTTGGACACTTTGTAGCAAATTGGGCAATATTGGAAGCCTTTGAGGGTGAGAGTTTTGTCCACGTGGTTGACCTCGGCATGAGCCTTGGCCTCCCACGTGGACACCAGTGGAGGGGACTGATCCAAAGCCTGGCAAGCCGTCCTGGAAACCCGGTTCGCCGCCTCCGGATTACCGGAGTAGGACTCTGCATTGGCAGGCTCCAGGTCATTGGTGATGAACTCTCTGTTTATGCAAACAGTTTAGGAATCAACTTGGAATTCTGCATTGTGCAGAAGAATCTGGAGAATCTGAAACCTGATGACATAAAAGTTCATGAAGAAGAAGTCCTTGTGGTGAATAGCATCCTTCAGTTGCATTGTGTTGTTAAGGAAAGCCGCGGCGCTTTGAACTCGGTACTTCAGATGATTCATGGTCTTTCCCCGAAAGTATTGGTCATGGTTGAGCAGGATTCAAGTCACAATGGACCATTTTTCTTGGGGAGATTTATGGAATCACTGCATTATTACTCTGCTATTTTCGACTCCCTTGATGCCATGTTACCAAAATATGACACTAAGAGGGCTAAGATGGAGCAATTTTACTTTGCTGAGGAGATAAAGAACATTGTGAGCTGTGAGGGCCCACTAAGGATGGAGAGGCATGAGAGGGTTGATCAGTGGAGAAGGAGGATGAGCAGAGCTGGGTTCCAGGCTGCACCTATTAAGATGGTGGCTCAGGCTAAGCAATGGCTTGTGAAGAACAAGGTTCATGATGGATACACAGTTGTGGAAGAGAAAGGGTGTTTGGTTCTTGGTTGGAAATCAAAGCCTATTATTGCAGCTTCATGCTGGAAATGCTAA 1557 0.4592 MSPVLYSAFNGEFDDESPIIGHDPSSITHYPYSLWPILESSASNCFFPISDETCRDNKRHKINTNTSIPIFLGSYSTNNCYGYLRNGSGTNIANSLPRPHMRDHIKRYLAAKAVDEAAEDMINSECGGGVSNEEDGCADGMIRLVQLLIACAEAVACRDKSHASTLLSELKSDALVFGSSFQRVASCFVQGLADRLALIQPAVGPVIGVVQPMMNIMDSASEKMEEAYRLVYDICPHIQFGHFVANWAILEAFEGESFVHVVDLGMSLGLPRGHQWRGLIQSLASRPGNPVRRLRITGVGLCIGRLQVIGDELSVYANSLGINLEFCIVQKNLENLKPDDIKVHEEEVLVVNSILQLHCVVKESRGALNSVLQMIHGLSPKVLVMVEQDSSHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQAAPIKMVAQAKQWLVKNKVHDGYTVVEEKGCLVLGWKSKPIIAASCWKC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1920 518 ProSiteProfiles GRAS family profile. 135 517 IPR005202 -
Aev01g1920 518 Pfam GRAS domain family 144 517 IPR005202 -
Aev01g1920 518 PANTHER DELLA PROTEIN RGL1-LIKE 86 517 - -
Aev01g1920 518 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 86 517 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1920 Aev-Chr1 24154800 24156356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1920 142 518 GRAS Transcription Factor Family AT1G66350 38.482 5.03e-78 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev01g1920 GRAS 1e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1920 - - gmx:100813548 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1920 01 24154800 24156356 Aev01g1920 01 24154800 24156356 ECH