Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1904 ATGGACATCGTAATAGAGGGTATCTCCGGCGCCCACTTTTCCGGTTGGAGACCTTCAACCACGTCGTCTCCTCCTTCTCCTTCCTCCTCTTCTCCTCATCAACCCTTCCTCATCGGGGTCTCTGGAGGAACGGCATCGGGTAAGACAACAGTGTGTGATCTGATCATTCAGCAACTACAAGATCACAGAGTTGTGCTCCTTAGTCAGGATTCATTCTACCGTGGTTTGACAAATGATGAGCTGAAACACGCTCATGAGTATAATTTTGATCATCCTGATGCATTTGATACAGAGCAACTTGTTGAAACGCTCAGCAAGCTCAAATCTGGGCAATCAGTTCAGGTTCCAATATATGATTTCAAGCTTCATCAGAGATCTTCTGAAAGATCCCGGCAGGTGAATGCATCTGAAGTAATCATTCTGGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGAATATGAAAATATTTGTTGATGCAGATCCTGATGTAAGGCTTGCCCGCAGAATAAGGCGTGATACTGTTGAGAGGGGTAGAGATCTACACTCTGTACTGGAACAGTATGTGAAATTTGTTAAGCCTGCCTTCGATGATTTTATTCTTCCATCCAAGAAGTATGCTGATATCATCATACCTCGCGGGGGAGACAATCATGTCGCAGTCGACTTGATAGTTCAACATATCCGCACCAAGCTTGGCCAGCATAACCTCTGCAAGATATATCCCAATTTGAATGTATTGCAGTCTACTTTCCAGACTAGAGGCATGCATACTCTTATTCGTGACAGGGATATATCAAAGCATGATTTTGTTTTCTATTCTGATCGGCTCATTCGATTGGTAGTGGAGCACGGTCTCGGTTACTTGCCATTTAAAGAGAAACAAGTTATCACGCCTACAGGATCACTTTATATTGGAGTTGATTTTTGTAAGAAATTGTGCGGAGTATCTGTTATCCGAAGTGGCGAAAGCATGGAAAATGCTTTGCGTACATGCTGTAAAGGAATAAAAATAGGAAAGATACTCATCCACCGTGAAGGTGATGAAACCCAGCTTATTTATGAGAAGCTTCCAAAAGACATTTCAGAGAGACATGTTCTTCTCATGGACCCAGTACTTGGTACAGGTAACACTGCCAGCCAAGCAGTTGAACTCCTTATAAAAAAAGGAGTTCCAGAGTCAAATATAATATTCCTCAACCTCATCTCAGCTCCAGAGGGAATACACTGTTTATGTAAACGTTTTCCACTACTCAAAATTGTCACTTCAGAGATTGATGAGCTAATTAATGAACAGTTCCGTGTGATACCTGGGTTGGGAGAATTTGCCGACCGATATTTCGGTACGGATGACTCTTAG 1371 0.4252 MDIVIEGISGAHFSGWRPSTTSSPPSPSSSSPHQPFLIGVSGGTASGKTTVCDLIIQQLQDHRVVLLSQDSFYRGLTNDELKHAHEYNFDHPDAFDTEQLVETLSKLKSGQSVQVPIYDFKLHQRSSERSRQVNASEVIILEGILVFHEQRVRNMMNMKIFVDADPDVRLARRIRRDTVERGRDLHSVLEQYVKFVKPAFDDFILPSKKYADIIIPRGGDNHVAVDLIVQHIRTKLGQHNLCKIYPNLNVLQSTFQTRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGYLPFKEKQVITPTGSLYIGVDFCKKLCGVSVIRSGESMENALRTCCKGIKIGKILIHREGDETQLIYEKLPKDISERHVLLMDPVLGTGNTASQAVELLIKKGVPESNIIFLNLISAPEGIHCLCKRFPLLKIVTSEIDELINEQFRVIPGLGEFADRYFGTDDS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1904 456 Gene3D - 31 238 IPR027417 -
Aev01g1904 456 TIGRFAM udk: uridine kinase 35 235 IPR000764 -
Aev01g1904 456 Gene3D - 239 453 IPR029057 -
Aev01g1904 456 PANTHER URIDINE KINASE 13 452 - -
Aev01g1904 456 Pfam Uracil phosphoribosyltransferase 253 453 - -
Aev01g1904 456 PANTHER URIDINE KINASE 13 452 - -
Aev01g1904 456 CDD PRTases_typeI 308 426 IPR000836 -
Aev01g1904 456 MobiDBLite consensus disorder prediction 14 40 - -
Aev01g1904 456 CDD UMPK 37 235 IPR000764 -
Aev01g1904 456 PRINTS Uridine kinase signature 167 177 - -
Aev01g1904 456 PRINTS Uridine kinase signature 35 52 - -
Aev01g1904 456 PRINTS Uridine kinase signature 65 76 - -
Aev01g1904 456 PRINTS Uridine kinase signature 181 192 - -
Aev01g1904 456 PRINTS Uridine kinase signature 110 125 - -
Aev01g1904 456 PRINTS Uridine kinase signature 203 216 - -
Aev01g1904 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 228 IPR027417 -
Aev01g1904 456 ProSiteProfiles UvrC family, homology region profile. 123 224 IPR001162 GO:0009381
Aev01g1904 456 MobiDBLite consensus disorder prediction 9 40 - -
Aev01g1904 456 SUPERFAMILY PRTase-like 238 454 IPR029057 -
Aev01g1904 456 Pfam Phosphoribulokinase / Uridine kinase family 37 223 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1904 Aev-Chr1 24040230 24044982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1904 1 455 PRT Gene Family AT3G27190 75.840 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1904 K00876 - gmx:100816209 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1904 01 24040230 24044982 Aev01g1904 01 24040230 24044982 ECH