Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1886 ATGGCATCGTCAAGCAGCAGCTACGACGTTCCATGGGTAGAGAAGTACAGACCCACCAAAGTCTCCGACATCGTCGGCAACCAAGACGCCGTTTCCAGGCTCCAAGTCATCGCCCGCGACGGCAACATGCCCAACCTTATTCTCTCCGGTCCTCCTGGAACTGGCAAAACCACTAGCATACTTGCCCTTGCGCATGAGCTTCTAGGATCCAATTGCAAGGAAGCGGTTCTCGAGCTCAATGCTTCAGATGACAGAGGAATTGATGTTGTTAGGAACAAGATCAAGATGTTTGCGCAGAAGAAAGTCACTCTCCCTTCTGGTCGCCACAAAATCGTTATTCTTGATGAAGCTGATAGCATGACTTCGGGGGCACAACAAGCTTTGAGGAGGACGATGGAGATATACTCGAATACCACTCGTTTCGCCCTAGCGTGCAACACATCGGCTAAGATTATTGAGCCAATTCAGAGTAGATGTGCCATTGTGAGGTTTTCACGATTGTCTGACCAGGAGATACTTGGTCGCCTCATGATCGTTGTTCATGCTGAGAAGGTTCCTTATGTTCCTGAAGGCCTTGAAGCCATCATTTTCACTGCTGATGGTGATATGAGGCAGGCATTGAATAACTTGCAAGCAACATACAGCGGATTCCAGTTTGTTAACCAATCAAATGTTTTTAAGGTTTGTGACCAGCCACATCCATTGCACGTGAAGAACATGGTGCGTAATGTGATCGAAGGGAAATTTGATGAGGCTTGTGTGGGTCTCAAACAACTCTATGATTTAGGATATTCCCCCACAGATATCATCACGACACTTTTCCGTATTATAAAAAACTATGACATGGCCGAGTACCTGAAACTGGAATTCATGAAGGAAACTGGATTTGCACATATGAGAATCTGCGATGGAGTTGGTTCTTATCTTCAGATGTGTGGTCTACTGGCTAAGCTTTCTCTAGTTCGTGAAACAGCTAAAGCTGTATGA 987 0.46 MASSSSSYDVPWVEKYRPTKVSDIVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGSNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGRHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVHAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQSNVFKVCDQPHPLHVKNMVRNVIEGKFDEACVGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGLLAKLSLVRETAKAV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1886 328 Pfam ATPase family associated with various cellular activities (AAA) 46 164 IPR003959 GO:0005524|GO:0016887
Aev01g1886 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 230 IPR027417 -
Aev01g1886 328 Gene3D - 168 231 - -
Aev01g1886 328 SUPERFAMILY post-AAA+ oligomerization domain-like 231 322 IPR008921 GO:0003677|GO:0006260
Aev01g1886 328 PANTHER REPLICATION FACTOR C SUBUNIT 2 4 326 - -
Aev01g1886 328 Pfam Replication factor C C-terminal domain 232 317 IPR013748 -
Aev01g1886 328 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 4 326 - -
Aev01g1886 328 Gene3D - 232 324 - -
Aev01g1886 328 SMART AAA_5 42 168 IPR003593 -
Aev01g1886 328 CDD HLD_clamp_RFC 167 229 - -
Aev01g1886 328 Gene3D - 3 167 IPR027417 -
Aev01g1886 328 CDD AAA 25 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1886 Aev-Chr1 23850005 23852313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1886 8 327 Core DNA Replication Machinery Family AT1G63160 91.875 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1886 K10755 - gmx:100781364 616.305