Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1885 ATGGGTAAGGCATCCAAATGGTTTCGCGGCCTTCTCGGTCTCAAAAAATCACAAGATTCCTATTCCAATCCCAATCCCAATCCCAATTCATCTCCCAAACCACCCAAACACAAGCGTCGATGGAGCTTCGTCAAATCTTACAGAGAAGATAGTAATAACAACAACACCAACAATAACTATGCTATTACTCCCATCCATCAACACCACGACGTCGATCCTGCTGATCCTACCAAGCGCGCCATCGCCGTCGCCGCCGCCACCGCTGCCGTGGCGGAGGCGGCTGTTGCGGCAGCTCAGGCGGCCGCGGTGGTGGTTAGACTGACGAGTAGCAGCGGTAGGTGCGCTGGTGGCGTAACCGCTACTAACCGCCAGGAATGGGCCGCCGTTAAGATTCAAGCTGCTTTTCGAGGCTGTTTGGCTAGGAGAGCATTGCGAGCGTTGAAAGGGTTGGTGAAGCTGCAGGCACTGGTGAGGGGTCGCATCGAGAGGAAGAGGACGGCAGAGGAGCTCAAAAGAATGCAAGCACTCTTACAAGCGCAGTCTAGAGCCCGTGCAGGCCGGCCTCAGATCCTTCATCACACCTCGAATTCCAGTTCTAAGTCGTCTTCGTGCCACCTCCATGGTCCAGCAACACCAGATAAATTTGAGAGCCCAATCAGATCTAAGAGCATGAAACATGATCACTCACCAGTACTAAAGAGAAACAGCTCCAAATCATGTGTCCTATTCAGTGGCAACAAAGAGAAACATAGGAACAAATCAGAAAGTCACACAGATGAACAATCATCATGGACTCAAGAAAGATCATCCATAAGAACATGCAGCAGCACTGAAAAAAGTGATAGCAGGAATCTTGAAGTTGATTCTGGGAAATCACAAGTCACATCAAAAAGAAGGAACCTATTTCCCTCTACTAGTACTCATAATCATGCTGTAACAGTTTCTTCTGATCATTATAATAGTAAGAGTTGGAGCACAACAAAGGACTCAAACTTGGTTGAGGAGAGTCAATTTTTCACTGCTGAAAATAGCCCTCAATTCTTATCTGCATCATCCAATGATAATGGATCCAAAAATACCCCTTTTACCCCTAATAGGAGTGAAGGCTCAAGGAGCTACTTTTATGGTTACTCAGATTATCCAAGTTACATGGCATATACTGAGTCTTCAAAGGCCAAAGTTAGGTCTCTTAGTGCCCCAAAACAGAGGCCACATTATGAAAGGACTAGTTCATCTAATAGGTACTCACTTAATGGATTTGGTGAATCAAAATTGGGAACTCAGAGAGTATCAACATTGCAATCAAGCTTCACAAGTAAAGCATATCCTGGTTCTGGAAGATTGGACAAGCTTGGTATGCCTGTGGGATATAGATTCTAG 1380 0.4609 MGKASKWFRGLLGLKKSQDSYSNPNPNPNSSPKPPKHKRRWSFVKSYREDSNNNNTNNNYAITPIHQHHDVDPADPTKRAIAVAAATAAVAEAAVAAAQAAAVVVRLTSSSGRCAGGVTATNRQEWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGRIERKRTAEELKRMQALLQAQSRARAGRPQILHHTSNSSSKSSSCHLHGPATPDKFESPIRSKSMKHDHSPVLKRNSSKSCVLFSGNKEKHRNKSESHTDEQSSWTQERSSIRTCSSTEKSDSRNLEVDSGKSQVTSKRRNLFPSTSTHNHAVTVSSDHYNSKSWSTTKDSNLVEESQFFTAENSPQFLSASSNDNGSKNTPFTPNRSEGSRSYFYGYSDYPSYMAYTESSKAKVRSLSAPKQRPHYERTSSSNRYSLNGFGESKLGTQRVSTLQSSFTSKAYPGSGRLDKLGMPVGYRF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1885 459 Pfam IQ calmodulin-binding motif 126 145 IPR000048 GO:0005515
Aev01g1885 459 PANTHER IQ-DOMAIN 5-RELATED 1 454 - -
Aev01g1885 459 MobiDBLite consensus disorder prediction 244 262 - -
Aev01g1885 459 MobiDBLite consensus disorder prediction 263 278 - -
Aev01g1885 459 MobiDBLite consensus disorder prediction 15 40 - -
Aev01g1885 459 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Aev01g1885 459 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Aev01g1885 459 MobiDBLite consensus disorder prediction 192 325 - -
Aev01g1885 459 Coils Coil 163 183 - -
Aev01g1885 459 MobiDBLite consensus disorder prediction 403 421 - -
Aev01g1885 459 MobiDBLite consensus disorder prediction 287 325 - -
Aev01g1885 459 MobiDBLite consensus disorder prediction 192 206 - -
Aev01g1885 459 Pfam Protein of unknown function (DUF4005) 344 418 IPR025064 -
Aev01g1885 459 MobiDBLite consensus disorder prediction 395 421 - -
Aev01g1885 459 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 454 - -
Aev01g1885 459 MobiDBLite consensus disorder prediction 218 233 - -
Aev01g1885 459 MobiDBLite consensus disorder prediction 346 368 - -
Aev01g1885 459 Gene3D - 121 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1885 Aev-Chr1 23839884 23848450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1885 1 459 IQD Protein Family AT4G23060 41.487 2.27e-70 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1885 - - gmx:100776656 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1885 01 23839884 23848450 Aev05g0953 05 6732260 6735599 PCT