Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1875 ATGGACATCCTTGAACAACCATGTTCATCTTCATCCTATTCATCAGAAACTAGCTCCTCAAATAATCAATACGAGGAACTGATTTTGGCGTCTTCGATGCCGAAGAAGCGCGCTGGGAGAAGAATTTTCAAGGAGACGAGGCACCCAGTCTACCGAGGAGTGCGGAAGAGGAACAACAACAAATGGGTCTGCGAGGTTCGCGTTCCAAACAGCAAGTCGAAAAGGATATGGCTCGGAACATACGCCACTCCCGAGATGGCGGCGCGTGCTCACGACGTCGCCGCCATAGCTCTTCGTGGGAAGTCCGCGTGCCTCAACTTTGCCGACTCAGCATGGCGGCTGCCCCATCCGACGTCCATGGACGCTGAGGATATAAGGAGGGCAGCAGCCGAGGCTGCTGAGTCGGTTGGAGTTGAGGACAGTTATAACTGCTCTCCGCAAATTGCGGATTATGAAGTTTGCAGCAGTGAGACGGTTGAAGATGTGAAGGAGCCGTTGAGAGGGTTGTGTCTTGAGGAAATTCGTGGTGTGTCGGAATTTGAGGACGTTCATGATTGGCTTCGGAGTATGGCTGATGAGCCTTTAAGATCTCCATCATCACCTCCTTTTGTGAGATATGGTGGTTATAGTAATAGGGAGTGGAATAATGATGTGGATGCTGACATTGAGGTGTCCTTGTGGAGTTTTACCATTTGA 696 0.5043 MDILEQPCSSSSYSSETSSSNNQYEELILASSMPKKRAGRRIFKETRHPVYRGVRKRNNNKWVCEVRVPNSKSKRIWLGTYATPEMAARAHDVAAIALRGKSACLNFADSAWRLPHPTSMDAEDIRRAAAEAAESVGVEDSYNCSPQIADYEVCSSETVEDVKEPLRGLCLEEIRGVSEFEDVHDWLRSMADEPLRSPSSPPFVRYGGYSNREWNNDVDADIEVSLWSFTI* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1875 231 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
Aev01g1875 231 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 8 231 - -
Aev01g1875 231 Coils Coil 231 231 - -
Aev01g1875 231 ProSiteProfiles AP2/ERF domain profile. 50 108 IPR001471 GO:0003700|GO:0006355
Aev01g1875 231 SUPERFAMILY DNA-binding domain 50 110 IPR016177 GO:0003677
Aev01g1875 231 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Aev01g1875 231 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Aev01g1875 231 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 8 231 IPR045277 GO:0003700
Aev01g1875 231 CDD AP2 51 110 IPR001471 GO:0003700|GO:0006355
Aev01g1875 231 Pfam AP2 domain 49 100 IPR001471 GO:0003700|GO:0006355
Aev01g1875 231 SMART rav1_2 50 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1875 Aev-Chr1 23721198 23721893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1875 25 198 AP2-EREBP Transcription Factor Family AT1G12610 51.913 2.22e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev01g1875 AP2 7.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1875 - - pvu:PHAVU_003G212800g 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1875 01 23721198 23721893 Aev05g0943 05 6646637 6647317 PCT