Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1865 ATGGTGAGGGGAAAGACTCAGATGAAGCGAATCGAGAACGAGACGAGCAGGCAAGTGACGTTTTCGAAGAGAAGAAATGGGCTTTTGAAGAAGGCTTTTGAGCTCTCAGTGCTGTGTGATGCTGAGGTGGCACTCATCATCTTCTCCACCAGAGGAAAACTCTATGAATTCTCCACCTCTAGTATAAACAAAATAGTCGAACGCTATCAAAGGAAGATCAAGGATATGGGTCTCAACACCAAAGGCAACCAACAAAATACACAGTCAAATGAAACTCAGCTAATCTGCCTCGGACTAGGTTCACCCACACTAGAGATGCAGCATATAAAGGAGGGTGATGATATCAAGTTGGAAAAGAAGATAGAGGACCTAGAAGCTTCTAAAAGGAAGCTTTTGGGACATGGTTTGGATACATGCTCACTTGACGAGCTACAGCAGTTGGAGATTCAGATTGAACGAAGCTTAAACAAAGTTAGGGCAAGAAAGAATCAATTGTTTAAGGAGCAAATTGAGAAGCTAAAGGAAGAGGAAAAACTCCTACTTGAAGAAAATAGACGACTGCAGGAGCAGTTGATTCAACAACAACAATCATTAAGCAAACAAGATGTGGTTCTCCTTAGAGAAACAAGAGGTGATGAGGACGAGGAAGAAGAGGAGGAAGATTTGGAGGTTGAAACAGAGTTGTTCATAGGGCGACCTCAGAGACGAAAGCCTTGA 717 0.4282 MVRGKTQMKRIENETSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSTRGKLYEFSTSSINKIVERYQRKIKDMGLNTKGNQQNTQSNETQLICLGLGSPTLEMQHIKEGDDIKLEKKIEDLEASKRKLLGHGLDTCSLDELQQLEIQIERSLNKVRARKNQLFKEQIEKLKEEEKLLLEENRRLQEQLIQQQQSLSKQDVVLLRETRGDEDEEEEEEDLEVETELFIGRPQRRKP* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1865 238 PANTHER MADS BOX PROTEIN 1 234 - -
Aev01g1865 238 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev01g1865 238 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Aev01g1865 238 CDD MADS_MEF2_like 3 70 IPR033896 GO:0000977|GO:0045944
Aev01g1865 238 Gene3D - 13 84 IPR036879 GO:0003677|GO:0046983
Aev01g1865 238 SUPERFAMILY SRF-like 3 73 IPR036879 GO:0003677|GO:0046983
Aev01g1865 238 Coils Coil 141 197 - -
Aev01g1865 238 MobiDBLite consensus disorder prediction 211 225 - -
Aev01g1865 238 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aev01g1865 238 PANTHER MADS-BOX PROTEIN SOC1 1 234 - -
Aev01g1865 238 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Aev01g1865 238 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev01g1865 238 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev01g1865 238 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev01g1865 238 MobiDBLite consensus disorder prediction 203 238 - -
Aev01g1865 238 Pfam K-box region 115 191 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev01g1865 238 ProSiteProfiles K-box domain profile. 107 197 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1865 Aev-Chr1 23624405 23634859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1865 1 236 MADS-box Gene Family AT4G22950 52.966 2.18e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev01g1865 K-box 1.6e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1865 01 23624405 23634859 Aev01g1865 01 23624405 23634859 ECH