Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1858 ATGCCGGCCTTGAGATGGCTTCATTCCAGCTCACCCCGAGAGGATACTACACCGTCAAACCACACATACCCGAAATTCTTGGGGCTGCAGCAACCAACGGGACTATGGAAAGAATCAAATTTTGGGAAAGGGGTTATTATTGGGGTGCTGGATTCTGGCATCACACCCGGCCATCCTTCGTTTAGCGACGCAGGAATGCCACCGCCACCTCCCAAATGGAAGGGGAAGTGTGAACTTAACGTGACAGCTTGTAACAGCAAACTAATTGGTGCAAGAACTTTCAAACTTGCAGCTATGGCAATGAAAGGAGGGAAACAAGAGCCACCAATTGATGATGATGGACATGGGACTCATACAGCAAGTACTGCAGCCGGTGCTTTTGTGGACTATGCAGAAGTACTAGGAAATGCCAAAGGCATAGCAGCAGGGATGGCCCCTTTGGCTCACCTCGCAATTTATAAAGTATGCTTCGGAGATCCCAGACCTGAGGCTGATACACTAGCAGCATTAGATGCAGCCGTGGAGGATGGAGTAGATGTAATATCGATATCCCTCGGTGTAAATGAGCCACCTCCGTTCTTCAATGATAGCATTGCAATAGGCGCATGTGCAGCAATTCAGCAAGGAATATTTGTAAGTTGTGCAGGAGGAAACTCTGGCCCTTTCAATGGCACCATATATAACGGAGCCCCATGGGTTCTCACAGTCGGAGCAAGCACTATTGACAGAAGCATCGCAGCAACAGCAAAGCTTGGAAACGGGGAAGAATTTGATGGTGAATCTGTTTTCCAGCCTTCCAACTTTCCTCAAACATTGCTGTCCTTGGCATATGCTGGCAAGAATGGCAAACCACAATCTGCATTGTGTGCTAATGGGTCCTTGAGTGACATTGACTTCAGAGGCAAGGTTGTTTTGTGTGAGAGAGGCGGGGGTATCGCAAGAACCGCAAAGGGGGAGGAAGTGAAAAGAGCTGGTGGGGCTGCCATGATTCTCATGAATGATGAAATCAATGGGTTTAGTCTTGCAGCTGATGCACATGTCTTACCTGCCACACATGTAAGCTATGCTGCTGGGCTGAAGATAAAGGCATATATAAATTCCACTGCAACGCCTACCGCAACCATTTTGTTTAAGGGAACTATCATCGGAAACTCCCTCTCTCCTGCTATTGCATCCTTTTCTTCAAGAGGTCCGAACTTGCCAAGTCCTGGTATTTTGAAACCGGATATCATAGGGCCAGGCGTTAACATCCTAGCAGCCTGGCCGTTCCCCCTTGAAAACAACTCTAAATCCACTTTCAACATTATGTCTGGCACACCGATGGCATGCCCGCATCTTAGTGGCATTGCTGCTTTGCTCAAAAGCTCTCATCCTAACTGGTCACCAGCTGCCATAAAATCAGCCATAATGACTTCTGCAGACATACTAAATTTAGAACACAAACCCATTGTTGATGAGACGCATCAACCTGCAGATATCTTTGCCACAGGTTCTGGCCATGTCAATCCATCAAGAGCAAATGATCCAGGACTAGTTTATGATATTGAACCAGATGATTACATACCCTATCTGTGTGGTTTAGGCTACAGTAATAGGGAGATTGGGATCATTGCACAAAGAAAAATTAAGTGCTCTGAAACTACAAGCATTCCCGAAGCAGAGCTCAATTAA 1671 0.4668 MPALRWLHSSSPREDTTPSNHTYPKFLGLQQPTGLWKESNFGKGVIIGVLDSGITPGHPSFSDAGMPPPPPKWKGKCELNVTACNSKLIGARTFKLAAMAMKGGKQEPPIDDDGHGTHTASTAAGAFVDYAEVLGNAKGIAAGMAPLAHLAIYKVCFGDPRPEADTLAALDAAVEDGVDVISISLGVNEPPPFFNDSIAIGACAAIQQGIFVSCAGGNSGPFNGTIYNGAPWVLTVGASTIDRSIAATAKLGNGEEFDGESVFQPSNFPQTLLSLAYAGKNGKPQSALCANGSLSDIDFRGKVVLCERGGGIARTAKGEEVKRAGGAAMILMNDEINGFSLAADAHVLPATHVSYAAGLKIKAYINSTATPTATILFKGTIIGNSLSPAIASFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLENNSKSTFNIMSGTPMACPHLSGIAALLKSSHPNWSPAAIKSAIMTSADILNLEHKPIVDETHQPADIFATGSGHVNPSRANDPGLVYDIEPDDYIPYLCGLGYSNREIGIIAQRKIKCSETTSIPEAELN* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1858 556 SUPERFAMILY PA domain 292 368 IPR046450 -
Aev01g1858 556 Pfam PA domain 287 361 IPR003137 -
Aev01g1858 556 CDD Peptidases_S8_3 21 474 IPR034197 -
Aev01g1858 556 MobiDBLite consensus disorder prediction 1 23 - -
Aev01g1858 556 Coils Coil 550 556 - -
Aev01g1858 556 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 21 556 - -
Aev01g1858 556 SUPERFAMILY Subtilisin-like 23 508 IPR036852 GO:0004252|GO:0006508
Aev01g1858 556 Gene3D Peptidase S8/S53 domain 44 520 IPR036852 GO:0004252|GO:0006508
Aev01g1858 556 CDD PA_subtilisin_like 248 375 - -
Aev01g1858 556 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 556 IPR045051 -
Aev01g1858 556 Pfam Subtilase family 42 474 IPR000209 GO:0006508|GO:0008236
Aev01g1858 556 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 47 58 IPR023827 -
Aev01g1858 556 Gene3D - 242 383 - -
Aev01g1858 556 ProSiteProfiles Serine proteases, subtilase domain profile. 26 507 - -
Aev01g1858 556 PRINTS Subtilisin serine protease family (S8) signature 42 61 IPR015500 -
Aev01g1858 556 PRINTS Subtilisin serine protease family (S8) signature 437 453 IPR015500 -
Aev01g1858 556 PRINTS Subtilisin serine protease family (S8) signature 111 124 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1858 Aev-Chr1 23571425 23573095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1858 19 545 Subtilisin-like Serine Gene Family AT1G04110 47.541 4.12e-169 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1858 - - gmx:100785376 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1858 01 23571425 23573095 Aev05g0926 05 6525584 6528060 PCT