Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1856 ATGGGGAGGCAACCTTGTTGTGACAAACTTGGGGTGAAGAAAGGTCCTTGGACTGCCGAGGAAGACAAGAAACTCATCAACTTCATTCTCACCAATGGCCAGTGCTGTTGGCGAGCCGTGCCGAAGCTCGCTGGCCTCCGCCGATGCGGCAAGAGCTGCCGCCTTCGTTGGACTAACTACCTGCGGCCGGACTTGAAGAGAGGGCTCCTCACAGAAGCAGAGGAGCAACTTGTAATTGATCTCCATGCCCGTCTTGGAAACAGCTTGTGGTTGGATGAAACACCACTTGTTGATGCATTATGGGACACCACAACAACACTTAAGGTGGAGAATATGAGTAATAATGATGAAATGGACCTAATAATTCCATCTTGGGAGGATAATTGTGCTAATTGGTTATTGGATTGTGAGGACTTTGGTATTCATGATTTTGGGTTCAATGAGATAGACTCAAATAATCCAATGCAAATTTTAGGAATGAAAGAAAAGGGTCCTTAG 498 0.4639 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNSLWLDETPLVDALWDTTTTLKVENMSNNDEMDLIIPSWEDNCANWLLDCEDFGIHDFGFNEIDSNNPMQILGMKEKGP* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1856 165 SMART sant 13 63 IPR001005 -
Aev01g1856 165 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 87 - -
Aev01g1856 165 CDD SANT 16 61 IPR001005 -
Aev01g1856 165 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev01g1856 165 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev01g1856 165 Gene3D - 11 67 - -
Aev01g1856 165 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev01g1856 165 PANTHER PROTEIN ODORANT1-LIKE 2 87 - -
Aev01g1856 165 SUPERFAMILY Homeodomain-like 15 88 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1856 Aev-Chr1 23544549 23546388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1856 1 87 MYB Transcription Factor Family AT4G12350 93.103 1.36e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev01g1856 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1856 K09422 - pvy:116121720 190.274