Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1845 ATGGCGTCCGAAGGCTTCACCGACAAGAACGCGGTGTTCAGGAAGCTCAAGGCCAAGTCGGAAAACAAGATTTGTTTTGATTGCAATGCGAAGAATCCGACCTGGGCGTCAGTAACGTATGGGATCTTCCTCTGCATCGATTGTTCTGCTGTTCATCGAAGCCTCGGCGTGCACATCAGCTTCGTGAGATCTACAAATTTAGACTCATGGAGTCCTGAGCAATTAAAAACGATGAGCTTTGGAGGAAACAACCGTGCACAGGTTTTCTTTAAGCAACATGGCTGGACTGACGGTGGTAAAATAGAGGCAAAGTATACTTCAAGAGCTGCGGATTTGTATAGGCAAATCCTGTCAAAGGAGGTAGCTAAAAGTATGGCTGAGGATGGAAATTTGCCATCATCACCTGTTGCTTCTCAGTCAGACCAAGGGTCTAATGGACTTCCTGAAGTCAAGACCAATAATGTTCCAAAAGAAAACACAATGGAGAAGCCAGAAAAGCCTGAGAGCACTTCTTCACCTCGGGCATCATATACTGTAGTTTCAAGTACTGTCAAGAAGCCTATTGGTGGTGCTAAAAAAACTGGGAAGACTGGGGGACTTGGTGCTCGTAAGCTCACTAAAAAGCCGAGTGAGTCTCTCTATGAGCAGAAGCCTGAAGAACTACCTGCTCCTGTTCCATCTTCAACCAACAACAGTGTGCTTGCTGGGCCATCTCTAACATCTCGATTTGAGTATGTAGAAAATGTCCAATCATCTGAATTGAACTCTGGAGGTTCACAAGTAATTGGTCATGTAGCTCCTCCGAAGTCATCAAGCTTCTTTTCAGACTTTGGAATGGATAGTGGCTTTCCCAAAAAATCTGGGCCTAGCTCATCAAAAGTGCAAGTTCAGGAGACGGATGAAGCAAGAAAGAAGTTTGCAAATGCAAAATCTATTTCTTCGTCTCAATTTTTTGGAGATCAGAACAATGCTGCAGATGCGGATGCTAAAGTGACTTTGTCAAAGTTTTCAAGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAATTCCGCCGTTGATGTTACTGCTAGTGACCTCATCAACCGATTATCTTTTCAGGCACAACAGGATATCTCTTCACTTAAAAACATTGCAGGGGAGACTGGGAAGAAGCTCAGTTCCTTGGCATCGACTTTGATGTCGGATCTTCAGGACAGAATCCTTTAA 1221 0.4431 MASEGFTDKNAVFRKLKAKSENKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKTMSFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAADLYRQILSKEVAKSMAEDGNLPSSPVASQSDQGSNGLPEVKTNNVPKENTMEKPEKPESTSSPRASYTVVSSTVKKPIGGAKKTGKTGGLGARKLTKKPSESLYEQKPEELPAPVPSSTNNSVLAGPSLTSRFEYVENVQSSELNSGGSQVIGHVAPPKSSSFFSDFGMDSGFPKKSGPSSSKVQVQETDEARKKFANAKSISSSQFFGDQNNAADADAKVTLSKFSSSSAISSADLFGDSRDNSAVDVTASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASTLMSDLQDRIL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1845 406 SUPERFAMILY ArfGap/RecO-like zinc finger 11 125 IPR037278 -
Aev01g1845 406 CDD ArfGap_ArfGap2_3_like 8 123 - -
Aev01g1845 406 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Aev01g1845 406 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Aev01g1845 406 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Aev01g1845 406 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 406 - -
Aev01g1845 406 MobiDBLite consensus disorder prediction 131 155 - -
Aev01g1845 406 Pfam Putative GTPase activating protein for Arf 12 100 IPR001164 GO:0005096
Aev01g1845 406 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 406 - -
Aev01g1845 406 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Aev01g1845 406 Gene3D Arf GTPase activating protein 2 139 IPR038508 -
Aev01g1845 406 MobiDBLite consensus disorder prediction 125 236 - -
Aev01g1845 406 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1845 Aev-Chr1 23426777 23430154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1845 13 91 C2H2 Transcription Factor Family AT4G21160 46.250 7.70e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1845 K12493 K11855 gmx:100785169 670.233