Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1838 ATGAATTTTCTAGATGTCACCATGGATCGTAAGAAGAAAGTTAACAAAAGAGAAGAATATGAAATTCTCTTAAAACCAGCATGTGCTGCACGTCTGTTTCAACTCACGCGTGAGCTGGGACTCAAGACTCATGAAGAGACAATTAAATGGCTATTGGCCCACGTTAAGCCCTCTATTGTCGCAACAATCAGCAAAGGAATATCATCATCATCTTCTTTACCTTCTTCTGTTGTTGTTAATGCATCGCCAACGTTATGTGAGAATAAAAATGATGTTAGTGAAGATGTGGAGAGTGAAAAAAAGCATGTGTTGCACGTCTATTTCAGCTCACGCGTGAGCTGGGACTCAAGACTCATGGAGAGACAATCAAATGGCTATTGGACCATGTTGAGCCCTCTATTGTCGCAACAATCAGCAAAAGGAATATCATCATTATCATCTTCTTTACCTTCTTCTGTTGTTGTTAATGCATTGCCAACGTTATGTGAGGATAAAAATGATGTTAGTGAAGATGTGGAGAGTGAAAAAAAGGTTGTTTAA 540 0.3889 MNFLDVTMDRKKKVNKREEYEILLKPACAARLFQLTRELGLKTHEETIKWLLAHVKPSIVATISKGISSSSSLPSSVVVNASPTLCENKNDVSEDVESEKKHVLHVYFSSRVSWDSRLMERQSNGYWTMLSPLLSQQSAKGISSLSSSLPSSVVVNALPTLCEDKNDVSEDVESEKKVV* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1838 179 ProSiteProfiles TCP domain profile. 7 62 IPR017887 -
Aev01g1838 179 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 85 IPR005333 GO:0003700
Aev01g1838 179 Pfam TCP family transcription factor 8 93 IPR017887 -
Aev01g1838 179 PANTHER TRANSCRIPTION FACTOR PCF1-LIKE 8 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1838 Aev-Chr1 23372133 23373678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1838 9 86 TCP Transcription Factor Family AT5G41030 42.308 9.38e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev01g1838 TCP 3.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1838 - K16221 ahf:112736155 73.9442