Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1837 ATGTTTTCTAATGTCTTCACAACTCTTGGGTCTTGGCAGATAATAAAGATGAGTAGTGTTGTGTATTCTCATGCTCTAAAATACACAAAAGGGGATTTGGCAAGAAACCAAGAAATGGATCATTCAAACATTGGTGATGCACAACAACATTGTCATCACCACCAGCAGCACAATTCAGGACTAATAATGGAAATGGAAACCATGTTGGCAAAGTTGATTTCACCCAACAACAACAGTTTGGAACAATTGCAGAGGTATGATAACGGAGGCAGGGGACTGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGACAAAGGAAGTGGTTACAATTTTGGATCTAATAATAATAATAATGAGTCTATGCTTTACCATCATCATCATGAGGAGCAAATTCAAGGCTTATCAAATAATGGTTCTATGAATGGATTTGCAATGGCTTTAGAGAATAACACACAAGCTGAAATGGGTTCTGCAAATTGCTCCAATAATTATTCACTTCATAATAATAACGGTTTTAGAGGGTGTGATGTGTCAAATGGAGAAGCTACAACATCAAGCAGTAGTGGAATAATGAATGGTGCTCTGAACTTCACAACTAGGCCATCCTATTGCAACATGCACATGCCACAGATTGTTGAAAGTGGAATTGAACCAAATTGTGTTCAGAATAGGAACCAGCAGGTGAGGAATGATAATGGCAGCAACAAAAGCTATATGCAAAACTACTTCACCACTGATTTCTGGGATGATTCTGCTTTCATCAGTGGCTCCAAAACAGCTAGTGGCAGCCGTGAAATCACCTTTTCCACTTCAAAGAATATTGCTTTGGAAGCTCAGGATGAAGATTTTGGATATAAAAAAATTGGTTTGACCCACCATTTGAGTTTACCTAGTTCATCTAGCAAGATGAGTGGCATGGATAAGTTGTTTCAAATTCAAGGATCTGTTCCATGTAAAATTAGAGCTAAAAGAGGGTTTGCAACTCACCCAAGAAGCATTGCAGAGAGGGAAAGAAGAACAAGAATTAGTGAAAGAATCAAGAAATTGCAAGACCTTTTCCCAAAATCAGACAAGCAAACAAGCACTGCAGATATGTTGGATTTGGCAGTTGAGTACATCAAAGATCTGCAGAAACAAGTCAAGATACTAAATGATAGTAGAGCAAAGTGCACTTGTTCATGTAATCAGAAGCAATAA 1200 0.3783 MFSNVFTTLGSWQIIKMSSVVYSHALKYTKGDLARNQEMDHSNIGDAQQHCHHHQQHNSGLIMEMETMLAKLISPNNNSLEQLQRYDNGGRGLKKEEEEEEEERDKGSGYNFGSNNNNNESMLYHHHHEEQIQGLSNNGSMNGFAMALENNTQAEMGSANCSNNYSLHNNNGFRGCDVSNGEATTSSSSGIMNGALNFTTRPSYCNMHMPQIVESGIEPNCVQNRNQQVRNDNGSNKSYMQNYFTTDFWDDSAFISGSKTASGSREITFSTSKNIALEAQDEDFGYKKIGLTHHLSLPSSSSKMSGMDKLFQIQGSVPCKIRAKRGFATHPRSIAERERRTRISERIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQVKILNDSRAKCTCSCNQKQ* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1837 399 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 52 397 - -
Aev01g1837 399 Coils Coil 397 399 - -
Aev01g1837 399 SMART finulus 333 383 IPR011598 GO:0046983
Aev01g1837 399 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 52 397 - -
Aev01g1837 399 MobiDBLite consensus disorder prediction 88 108 - -
Aev01g1837 399 Pfam Helix-loop-helix DNA-binding domain 333 378 IPR011598 GO:0046983
Aev01g1837 399 Gene3D - 329 399 IPR036638 GO:0046983
Aev01g1837 399 MobiDBLite consensus disorder prediction 80 121 - -
Aev01g1837 399 CDD bHLH_AtbHLH_like 332 384 IPR045239 -
Aev01g1837 399 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 327 377 IPR011598 GO:0046983
Aev01g1837 399 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 330 391 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1837 Aev-Chr1 23359748 23363870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1837 278 394 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 62.393 8.88e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev01g1837 HLH 5.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1837 - - gmx:100795896 328.176