Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1833 ATGTCCCCTACGTTCTTTTTCGAACCCCAAAGCGACGAAGAGATCGAACAATCCGAAGAAGAACACTCACAATCGGAATCCGAACCTGAATCCGAACCAGAAAATTCAGAATCGGAAGAAGAGCAAGAAGAAGGAATAGAAGCTTCTAGAACCTCGAAGAAGGAGCAGGAAAACAAGAAGAAGAAGAAGAAGACGCAGTCTCCATGGGACTTTGCGAAGTATACGGAGTCCGTGGCGGAGGAACACGCTCGCCGGAGCACCACCTCCGTCGATGAAAAGATCTCCAAAGCCCTCAAGCAACGTTCCACGCCTCTAGCGTTACCTTCCCAAAACGACGACGTTGAGAACAGCGATTCTGACTCAGAACCTGATATTAAACAAGATGATTATAGACCAGACGAAGAAGATGAAGAGGAGGGTAATGCTGGTGACAGCAAGTCCTTTTTTGCTCCTTCTGATGGAGCTTCTTTCCATGCTGATTCGTTCATGCAGCTTAATTTGTCACGGCCTTTGCTCCGGGCTTGCGAGGCCTTGGGTTATGCTAAACCAACACCAATTCAGGCCGCCTGTATACCATTGGCATTGACTGGTCGCGATATATGTGGTAGTGCTATTACTGGGTCGGGGAAGACAGCTGCATTTGCGCTTCCCACTCTGGAAAGGTTGTTGTTCCGTCCAAAACGCATGCATGCAATAAGGGTCCTCATTCTTACGCCAACCAGAGAATTGGCAGTCCAAGTTCACAGTATGATAGAGAAGCTTGCTCAGTTTACTGATATAAGGTGTTGCCTGGTTGTTGGGGGTCTGTCAACAAAGGTGCAAGAAGTTGCCTTGAGATCAATGCCAGACATTGTTGTTGCTACCCCTGGACGTATGATAGATCATTTACGCAATTCTATGTCAGTGGATTTGGATGATCTTGCTGTACTAATTCTTGATGAGGCAGATCGTCTTTTAGAGCTTGGATTTAGTGCTGAAATTCATGAACTTGTTCGCATGTGCCCCAAAAAAAGGCAGACAATGCTATTTTCAGCAACCATGACTGAGGAGGTTGATGAACTAATTAAACTGTCGCTGTCAAAACCCTTGCGTCTTTCTGCTGACCCCTCAGCAAAACGACCGGCAACCTTGACTGAGGAAGTGGTTAGAATTCGAAGGATGCGTGAAGTAAATCAGGAAGCAGTTCTTCTTGCACTATGCTCCAAAACTTTTACTGCTAAAGTGATCATCTTCAGTGGAACAAAGCAAGCTGCACATAGATTGAAGATTATATTTGGATTAGCTGGCTTGAAAGCTGCTGAACTTCACGGAAATCTTACCCAGGCCCAGCGTCTTGAAGCTTTGGAACAGTTCAGGAAGCAGGAAGTTGACTTCCTGGTTGCAACTGATGTGGCTGCTCGTGGCCTTGACATTATTGGTGTTCAAACAGTTATCAACTTTGCGTGTCCCCGTGATCTTACCAGTTATGTTCATCGAGTGGGTCGTACTGCAAGAGCTGGGAGAGAAGGATATGCTGTTACGTTTGTGACTGATAATGACCGGTCACTTTTAAAAGCCATTGCAAAAAGAGCTGGTTCAAAGCTTAAGAGCCGCATTGTAGCAGAGCAATCCATACATAAATGGTCTCATATAATTGAGCAAATGGAGGATGAAATTGCTGAAGTACTTCAAGAAGAGAGGGAAGAAAGAGCCTTAAGGAAAGCTGAAATGGAGGCCACAAAGGCTGAAAACATGATTGCACATAAGGAAGAGATCTTTTCCCGTCCCAAAAGAACCTGGTTTGTCACAGAGAAGGAAAAGAAGCTTGCTGCGAAAACAGCAAAGGCAACTATGAATAAGGAAAAGAGTTCCGGGAAGGAGGTAATTAGTGCTCAGGAAGCTGAAGATCTCAAAATGAAGGAAAAGAGGAAGCGAGAGCGAGAGAAAAATCTGCCCAGAAAGAAGCGTAGAAAATTGGAAGCGGCTAGAGAGATGTTGGAGGATGAAGAATATGATAATGACAAGCCGGAGGCTAAGGGGACAAATAAGAAAGAAAAGGGTGGAATGTCGCTTGTGGATCTTGCTTATCGACGAGCAAAAGCAGTAAAGGCCACCAAGAGGGCCGTAGATTCTGGAAAGATTGTGCAGAAGAATAAAAAGAAGCCTGATCGTGATCGTCCTTCGAAAAATACTCCTTCAAGGACAGAGGAGATGCGGGAGCTATTCCAGGCTGACATGAAGGATAAAAAACCAAAAAGAAGAGGTCTTGGAGGAGGAAAGAAATCCAAGAGTTCATTCAAAAGCAAGTCAAGGTACAAGCGCAGGTAG 2307 0.4517 MSPTFFFEPQSDEEIEQSEEEHSQSESEPESEPENSESEEEQEEGIEASRTSKKEQENKKKKKKTQSPWDFAKYTESVAEEHARRSTTSVDEKISKALKQRSTPLALPSQNDDVENSDSDSEPDIKQDDYRPDEEDEEEGNAGDSKSFFAPSDGASFHADSFMQLNLSRPLLRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLVVGGLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIHELVRMCPKKRQTMLFSATMTEEVDELIKLSLSKPLRLSADPSAKRPATLTEEVVRIRRMREVNQEAVLLALCSKTFTAKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQEVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIHKWSHIIEQMEDEIAEVLQEEREERALRKAEMEATKAENMIAHKEEIFSRPKRTWFVTEKEKKLAAKTAKATMNKEKSSGKEVISAQEAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDEEYDNDKPEAKGTNKKEKGGMSLVDLAYRRAKAVKATKRAVDSGKIVQKNKKKPDRDRPSKNTPSRTEEMRELFQADMKDKKPKRRGLGGGKKSKSSFKSKSRYKRR* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1833 768 MobiDBLite consensus disorder prediction 746 768 - -
Aev01g1833 768 Gene3D - 126 367 IPR027417 -
Aev01g1833 768 MobiDBLite consensus disorder prediction 692 745 - -
Aev01g1833 768 PANTHER BNAA01G17110D PROTEIN 58 291 - -
Aev01g1833 768 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 395 539 IPR001650 -
Aev01g1833 768 CDD SF2_C_DEAD 377 509 - -
Aev01g1833 768 PANTHER RNA HELICASE 316 722 - -
Aev01g1833 768 MobiDBLite consensus disorder prediction 606 768 - -
Aev01g1833 768 MobiDBLite consensus disorder prediction 45 98 - -
Aev01g1833 768 CDD DEADc_DDX27 171 366 - -
Aev01g1833 768 MobiDBLite consensus disorder prediction 1 150 - -
Aev01g1833 768 MobiDBLite consensus disorder prediction 646 679 - -
Aev01g1833 768 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 520 IPR027417 -
Aev01g1833 768 Coils Coil 46 66 - -
Aev01g1833 768 MobiDBLite consensus disorder prediction 606 639 - -
Aev01g1833 768 Gene3D - 386 621 IPR027417 -
Aev01g1833 768 Coils Coil 624 644 - -
Aev01g1833 768 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 160 188 IPR014014 GO:0003724
Aev01g1833 768 Pfam DEAD/DEAH box helicase 184 354 IPR011545 GO:0003676|GO:0005524
Aev01g1833 768 PANTHER BNAA01G17110D PROTEIN 316 722 - -
Aev01g1833 768 SMART ultradead3 179 380 IPR014001 -
Aev01g1833 768 Pfam Helicase conserved C-terminal domain 396 500 IPR001650 -
Aev01g1833 768 MobiDBLite consensus disorder prediction 12 44 - -
Aev01g1833 768 Coils Coil 538 585 - -
Aev01g1833 768 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 311 319 IPR000629 -
Aev01g1833 768 PANTHER RNA HELICASE 58 291 - -
Aev01g1833 768 SMART helicmild6 415 500 IPR001650 -
Aev01g1833 768 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 191 365 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1833 Aev-Chr1 23327218 23333677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1833 121 517 Eukaryotic Initiation Factors Gene Family AT3G13920 33.000 1.04e-51 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1833 K13181 - gmx:100776684 1073.15