LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g1677	ATGACTGCCTGTCCTGTTTTTCCTGTTTTGGTTCCTCATCATCTATTCTATCGTTACTTTTATCTAGAGATGGATGCACCGGTGGATTTCTTCAACAATGCTTATTTTGATCCTTATCTAGAAATTATGGACTCTACTGATTTATTTGATTTTGTTGATTCTCACATGGTTGATTTGGATGACGATGGTGATGGGCAACTACAAAAAACATCATCTTTGGGTGGAGAACAAACTGCACATGTTAACACTGGTGCTGAGCTTATTGGTAATGGGCAGATAATTGCACAATATGTACCAGTTATTGATCGTGGAATTCCAACATCTACTGAAAACACCATTGTTGTCAATGTCGTGAATGATGTGTCTGATTCTCAAGATGAATCTCAGGTCCTGAATGGTGATGGGAAAACTGACAATATTGTTTTACCAGAAATTAATTATGCTAATTCTAGTTGTGATGTAGATGTAGAAAATATTAATGACATTATTGATTCATTGGGTGATGATGCAGATAATGAGGATGTTGATGATGTTGACTTGATCTGTGTTGATGACGGGGGGATTGAATACTTCTCATGTGAAAAAATGGTTACCCCAGGTCAGGCTACTGGAAGTGCAATGATATTGCCTAGACGGTTTACAAAGCATGCATTTCCAAATAGGATTCATGATATCAAGCTCCATGATAGAAGTGGAAGGATTTATGCTGCTACTCTAAGGTTTAGTGAGAAAAGTGTGAAAGATCTTTACATTGGAAGAGGCTGGAAGAGTTTTGTCAGGTATAACCATGTCAAGAGTGGGGATAAGTTGATGCTTCGTGTCCCTGTTAATGATGAATCTATGGTGTATGCTGACATTGTATGA	864	0.3773	MTACPVFPVLVPHHLFYRYFYLEMDAPVDFFNNAYFDPYLEIMDSTDLFDFVDSHMVDLDDDGDGQLQKTSSLGGEQTAHVNTGAELIGNGQIIAQYVPVIDRGIPTSTENTIVVNVVNDVSDSQDESQVLNGDGKTDNIVLPEINYANSSCDVDVENINDIIDSLGDDADNEDVDDVDLICVDDGGIEYFSCEKMVTPGQATGSAMILPRRFTKHAFPNRIHDIKLHDRSGRIYAATLRFSEKSVKDLYIGRGWKSFVRYNHVKSGDKLMLRVPVNDESMVYADIV*	288

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev01g1677	287	SUPERFAMILY	DNA-binding pseudobarrel domain	191	282	IPR015300	-
	Aev01g1677	287	Pfam	B3 DNA binding domain	195	274	IPR003340	GO:0003677
	Aev01g1677	287	ProSiteProfiles	B3 DNA-binding domain profile.	192	287	IPR003340	GO:0003677
	Aev01g1677	287	SMART	B3_2	193	285	IPR003340	GO:0003677
	Aev01g1677	287	Gene3D	-	190	285	IPR015300	-
	Aev01g1677	287	CDD	B3_DNA	191	273	IPR003340	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev01g1677	Aev-Chr1	20852171	20854085	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	B3	Aev01g1677		B3	3.2e-11	CL0405

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g1677	-		K01620	adu:107466241	67.0106