Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1644 ATGGCCGTTTTCATCCGTTGCGGGATTGTGCTTGCTCTGTTTCTATTCTTCTACGTCCTCTGTTTCCATGCTCTGTTTTCACACGCAGCCAATTCCACCATACAGAGTACAGAACTCATCATGACGGAGAAACTCTGGTCTCCGATGGCCTCACCTTCGAAATGGGTTTCTTCAGTTTTGGAAACTACTCCTCAAGATACGTCGGGATTTGGTACCACAACGTTCCTGTCCCAGCAATATATGGGTTGCGAACAGAGAGAAACCAGTCCAAGGCAGAGGAGGCCTTGGGGAGGGAGAAACACCTTTACTACTAGAGGGAGGCAAAAGGAGAATGGTGAGGGAGCGTTCACACATGAGAGTGAGAGACGCGGTTGGAAGTTTAGAAACGATGGCACCAAAGGAGTTGGATGGAGCCCGAATCCATCAAATTTGAGGAACACCAAAAATTTGATTTCATTGTTTATCGATAACATCCCCCTCTCCAAGTCTAAAGCCTGGCTATGGAGAACTTTTAAACCTTATGGCTGGATCGTGGATATTTTCCTATCAAGAAGAAAACGCTCGAGCAATCCTCTAGCCTTTGGGTTTATTCGGTTTAACTCAATGGAAGATGCATCAAGAGCCATCGAAGGTACTAATGGATGGGAAATTGAAGGAGCAAACCTCCGTGTGAGTCTTGCTTGGAGATCCAGGAATCAGCTACCCACTGGTATGAGTTGGAGACCAGTGAGTAAAAAGAACACCATTATGGAGGACAAAGCAAATCACATCCAGAATCAGGATAAGCCTAAAGATGATGGTGAACAGGGTGATGATGAAAAGCAGGAGGATAGAACATATTTCATTAGGGGAAAAATCAACGAAGATAAACTAAGATGGATTAAGAAATGTTGTGTGCTACAGGTTGAACAACTGACAGAATTGGAGGCGAAAACATGGCTTGATATGGAATGGCTACCAGAACTGAATGTTAAAGTTAGGCCATGGAAGCATGACTCTTTAAATGATGCTAGAGTGGTATGGTTAAAGTGTTCTGGTCTTCCCATTCATGGCTGCAATGTGGAAAACTATATGGCTATTTCAAAGTTTTGGGGATCGCTTGTTGACTATAAGGAAGATGATGATTTTAAGTCCATGAAAATCAGAATTGTTACTCACACACAAGGAGTGATCGGCGGACGAATTTGTTTAGCTCTTGGGGATTCAAATTTTCCAGTCCATATACAGGAGATTAATACAACAAATCAGGAGGAAAGTAATTTTCTGGGTGAAGATGAACAGATTGGAACTCATACCAAGGAAGACGAAACGATAGTGGCGGATTCTGAGCAACAATTATTGGGTCATACTCCTAATAATGGTACGGTCCAATTCCCTGAACTAGTTAATGATAATTCAATTGGGGTCTTGAATACGAGGGGGATTGAATCATTGGAAGGCACAAAAGAGTGTGGGAACTTAATTGGGCTCCAAATTGCCATTGGGCCCAACTCGGATTCTGCCTCTAAGACTAAAAGCCTCGCCGACAGCCAAGAAACAAAACACTTTATTACTAGTGCCCGCAAAATTAGACCCAACTTTATTGATCCAAGCCTTAATCGTTCCGAGTCTCTTGGGCCACCACCGGGCTTTGAAAAACCGAACCCAAAACTGGTTAATGAAATTGAGGGTAAACCTGAGGGTGTGTGCAGCGCAGACGGGGATGATTTTGAACCCCAAAACTCCATTGAAGACACCCCTGAGGTCTCTGAAGAAGATGAGAAGGACCTGGTAGAAGAAGAAGAAGTCATAAAACAGACTGCAAAAGCAATTGAGGCGGGTAGAGCGGCGGGTTTCCCGATTGACTCAGAAGAGGATTATCTCTATACAAAGGCGATTACAAGGATTAAAAGACGCCAAAAATTGCGTGCTAGAAACTGGAAAAAAGCCCAAGAAATGCCCACTCCTGAAGCAGTAAAGAGGATGAGGACTACCAGTCGATAA 1983 0.4372 MAVFIRCGIVLALFLFFYVLCFHALFSHAANSTIQSTELIMTEKLWSPMASPSKWVSSVLETTPQDTSGFGTTTFLSQQYMGCEQRETSPRQRRPWGGRNTFTTRGRQKENGEGAFTHESERRGWKFRNDGTKGVGWSPNPSNLRNTKNLISLFIDNIPLSKSKAWLWRTFKPYGWIVDIFLSRRKRSSNPLAFGFIRFNSMEDASRAIEGTNGWEIEGANLRVSLAWRSRNQLPTGMSWRPVSKKNTIMEDKANHIQNQDKPKDDGEQGDDEKQEDRTYFIRGKINEDKLRWIKKCCVLQVEQLTELEAKTWLDMEWLPELNVKVRPWKHDSLNDARVVWLKCSGLPIHGCNVENYMAISKFWGSLVDYKEDDDFKSMKIRIVTHTQGVIGGRICLALGDSNFPVHIQEINTTNQEESNFLGEDEQIGTHTKEDETIVADSEQQLLGHTPNNGTVQFPELVNDNSIGVLNTRGIESLEGTKECGNLIGLQIAIGPNSDSASKTKSLADSQETKHFITSARKIRPNFIDPSLNRSESLGPPPGFEKPNPKLVNEIEGKPEGVCSADGDDFEPQNSIEDTPEVSEEDEKDLVEEEEVIKQTAKAIEAGRAAGFPIDSEEDYLYTKAITRIKRRQKLRARNWKKAQEMPTPEAVKRMRTTSR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1644 660 MobiDBLite consensus disorder prediction 87 107 - -
Aev01g1644 660 SUPERFAMILY RNA-binding domain, RBD 149 237 IPR035979 GO:0003676
Aev01g1644 660 MobiDBLite consensus disorder prediction 527 588 - -
Aev01g1644 660 MobiDBLite consensus disorder prediction 571 588 - -
Aev01g1644 660 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 151 229 IPR000504 GO:0003723
Aev01g1644 660 Gene3D - 138 285 IPR012677 -
Aev01g1644 660 MobiDBLite consensus disorder prediction 253 276 - -
Aev01g1644 660 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 153 222 IPR000504 GO:0003723
Aev01g1644 660 SMART rrm1_1 152 225 IPR000504 GO:0003723
Aev01g1644 660 MobiDBLite consensus disorder prediction 638 660 - -
Aev01g1644 660 CDD RRM_SF 153 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1644 Aev-Chr1 20438860 20442259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1644 134 227 Eukaryotic Initiation Factors Gene Family AT3G11400 28.723 3.91e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1644 - K14573 csin:114265048 81.6481