LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g1643	ATGTTGCTGCTGCACCCAACAAATAACAATAATAAGCTAGTTGTGCTCCTAATAATAATAATATGGTGGTGGACATGGCTTCACGGTGCAGTCGTTGTAGTTGGAGACCCACAGACACATATACTGAACATAGGGTGCAGTACATACAACTCATCAAACTTGAGAAGCTTCTATGCAAACATCAACGGAACGTTCTCAGAGATGAGAGGAGGGATAAGAAATCATAGCAAGCACTTTGGAACAGCACAAGAAGCAAGAGGTGAGATCATAACATATGCTATGTATCAGTGCAGAAACTACCTCTCCAAGAAGGATTGTCTTCGCTGCTTCAATACTGCCACGAGGCTAATTCGTAACTGTTCTAATGCCAATGGTGCTAGAGTCATATGCGATGGTTGCTTCCTTAGGTACGAGAGCAATATCTTCTTTGACCAAAACACTCAACCCGGGAATGGTGTATCATGTGGGAACAAGACCGCAAAAGAAACCACTTCTTTTAGTGCAATTGGGAAACAAGTATTAACAAATCTCCAAATTGCAACACCAAAAATTAATGGCTTTTATGCAGCTACTAAGACACAAGTAGCACTTGGTGGTGCTTCAATCTATGCAATTGCACAATGTGCTGAAACTGTCACAGAGGCTGGTTGTTTAAATTGTCTGACAGTTGGATACAATAATTTACAAACTTGCCTTCCAAACACAGATGGCAGAGCATTTGATGCAGGGTGCTTCATGAGATACTCTCAGACTCCCTTTTTTGCTGATAATCAGACCATTGATATCACACCCTTCTTAAAACAAGGAGGTTCAAGCAAGAATTGGGGAATTATAGGTGGTGTTGTTGGAGGTGTAGCTTTTCTTTTGATCCTTCTTGCATTATTTCTGTGGTATAGAGAATCCAAGAAACCTAAAAGAGTTCCTAGAGGTGATATATTGGGAGCAACTGAGTTAAAAGGTCCTGTTAGTTATAAATATAGTGATTTGAAAGCTGCAACAAAAAATTTCAGTGAAGAAAATAAATTAGGAGAAGGAGGCTTTGGCAGTGTATACAAGGGTACTCTGAAAAATGGGAAAGTAGTTGCAATCAAGAAGTTGATTTTAGGGCAATCCAACAAAATGGAGGATGATTTTGAAAGTGAAGTCAAACTTATAAGTAATGTGCATCATCGGAATCTAGTTAGACTTCTTGGATGTTGCAGCAAAGGCCAAGAGAGAGTCCTTGTTTATGAATACATGGCAAACAATAGCCTTGACAGATTTTTATTTGGTGAAAAAAAGAGTTCCCTGAACTGGAAACAAAGGTATGATATAATATTAGGCACAGCAAGGGGATTGGCTTATCTACATGAGGAATTTCATGTTTCTATCATACATAGAGATATAAAGACTGGAAATATCCTTTTGGATGATGAACTTCAACCCAAAATTGCTGATTTTGGATTGGCAAGGCTTCTACCAGGGGATCAATCTCATCTTAGCACAAGATTTGCAGGAACATTGGGATACACAGCACCAGAATATGCAATTCATGGTCAATTATCAGAGAAAGCTGATACATACAGTTATGGAATTGTAGTTCTAGAAATCATAAGTGGTCAAAAGAGTACTGAAGTGAAGGTTGATGACAATGGTCATGAATACCTTCTTCAACGAGCATGGAAATTGCATGAGCAAGACATGCACATGGAATTGGTGGACAAAAGCTTAGACCCTAATGAGTATGATACAGAGGAAGTGAAGAAAATAACAGAGATTGCTCTGTTGTGCACTCAAGCATCAGCTTCAATAAGGCCAACAATGTCAGAAGTAGTAGTATTACTAAAAAGCAAGAACTTAATTGAGCATATGCAACCATCAATGCCAGTATTTATTGAGTCAAATTTGAAGTCAAGGTCTGACATATATGCCTCAACTGCTTCCTCTACAACTGCATCCAATACCACTGGATCCAATGCTACTGTCTCCACTACTATAGTCTCAGCTCGATGA	1992	0.3901	MLLLHPTNNNNKLVVLLIIIIWWWTWLHGAVVVVGDPQTHILNIGCSTYNSSNLRSFYANINGTFSEMRGGIRNHSKHFGTAQEARGEIITYAMYQCRNYLSKKDCLRCFNTATRLIRNCSNANGARVICDGCFLRYESNIFFDQNTQPGNGVSCGNKTAKETTSFSAIGKQVLTNLQIATPKINGFYAATKTQVALGGASIYAIAQCAETVTEAGCLNCLTVGYNNLQTCLPNTDGRAFDAGCFMRYSQTPFFADNQTIDITPFLKQGGSSKNWGIIGGVVGGVAFLLILLALFLWYRESKKPKRVPRGDILGATELKGPVSYKYSDLKAATKNFSEENKLGEGGFGSVYKGTLKNGKVVAIKKLILGQSNKMEDDFESEVKLISNVHHRNLVRLLGCCSKGQERVLVYEYMANNSLDRFLFGEKKSSLNWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTGNILLDDELQPKIADFGLARLLPGDQSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEVKVDDNGHEYLLQRAWKLHEQDMHMELVDKSLDPNEYDTEEVKKITEIALLCTQASASIRPTMSEVVVLLKSKNLIEHMQPSMPVFIESNLKSRSDIYASTASSTTASNTTGSNATVSTTIVSAR*	664

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev01g1643	663	ProSiteProfiles	Gnk2-homologous domain profile.	39	142	IPR002902	-
	Aev01g1643	663	ProSitePatterns	Protein kinases ATP-binding region signature.	342	365	IPR017441	GO:0005524
	Aev01g1643	663	SUPERFAMILY	Protein kinase-like (PK-like)	319	608	IPR011009	-
	Aev01g1643	663	PANTHER	CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN	30	647	-	-
	Aev01g1643	663	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	30	647	-	-
	Aev01g1643	663	CDD	STKc_IRAK	342	609	-	-
	Aev01g1643	663	SMART	serkin_6	336	614	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev01g1643	663	Gene3D	Phosphorylase Kinase; domain 1	309	412	-	-
	Aev01g1643	663	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	457	469	IPR008271	GO:0004672\|GO:0006468
	Aev01g1643	663	Gene3D	Transferase(Phosphotransferase) domain 1	413	622	-	-
	Aev01g1643	663	Gene3D	-	152	253	IPR038408	-
	Aev01g1643	663	Gene3D	-	38	142	IPR038408	-
	Aev01g1643	663	Pfam	Protein kinase domain	337	604	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev01g1643	663	Pfam	Salt stress response/antifungal	49	139	IPR002902	-
	Aev01g1643	663	Pfam	Salt stress response/antifungal	155	250	IPR002902	-
	Aev01g1643	663	ProSiteProfiles	Protein kinase domain profile.	336	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev01g1643	663	MobiDBLite	consensus disorder prediction	640	663	-	-
	Aev01g1643	663	ProSiteProfiles	Gnk2-homologous domain profile.	148	253	IPR002902	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev01g1643	Aev-Chr1	20429812	20437376	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev01g1643	33	634	Receptor kinase-like Gene Family	AT1G70520	37.213	9.72e-129	393

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Aev01g1643		Pkinase	2.3e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g1643	-		-	gmx:100813585	912.138