Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1642 ATGTTGAAACCACTGAACAACAAGCTCAGAGCCTTGACCTTCACGATCATCGCATCATTGTGGTCCCAAAATTGGACCTTGTTCTTCCATGGAGTACTAGGAGGAGACCCTCAAACCCTTTTGCTCAACAAAGGTTGTAGCCAATACAACGCAACAAACTTGTCCAATTTCAACCAAAATCTAAACTCAACTTTGTCGGACCTTAGAAACCAAAGCATAAGCAAGGATTTTGGAACAGCACAACATGCTGTTGGAGCTGACCCTGTTTATGCTATGTTCCAATGCCGGGACTACTTATCAGAGGCCGATTGCGCCGCTTGCGTTGCCGTCGCCGCCACCCAAATCAGGAACTGCTCCGCCGGAGCTAATGGTGCCCGTGTCATATACGATGGATGCTTCATCAGGTATGAGAGCAATGGCTTCTTTGACCAAACCACTCTACCAGGAAACAGCATGATTTGTGGGAACAAAACAGCAAGTGGAGGAGGAGCCACTACATTCAATGGAGTTGCACAACAAGTGTTAAAGGATCTTCTAACAGCAACACCCAAAATCCATGGTTTTTTTGCAGCCACCAAGACACTAGTAGGCGGTGGTGGTGGTGCAATCTATGCAATTGCACAATGTGCTCAAACTGTCTCTGAGAGTGGTTGTTTAGATTGTTTGACAGTTGGATTCAACAACATACAGAGTTGTCTTCCAAACACAGATGGCAGAGCATTTGATGCAGGGTGCTTTATGAGATACTCTCTGACTCCCTTTTTTGCTGATAATCAGACCATTGATATCACACCCTACTTAAAACAAGGAGGATCAAGCAAAAAGGGGGCTATTATTGGTGGTGTTGTGGGAGGTGTAGTGGTTCTTGTGATCCTCTTTGCACTATTTGCTTGGCTTCAAAGAAACAAGAAAGCCAGGAAAGTTCCTAGAGGTGACATATTGGGAGCTACTGAGTTGAAAGGTCCAGTTATATATAGGTACAAAGATTTGAAGTCTGCAACAAAGAACTTCAGTGATGAAAATAAACTAGGAGAAGGAGGTTTTGGAGGTGTATACAAGGGTACTTTGAAAAATGGAAAAGTAGTAGCTGTCAAGAAATTAATTTTAGACCAATCTGGAAAGATGGATCAAAGTTTTGAGAGTGAAGTGAGACTTATAAGCAATGTTCATCACAGGAATCTGGTTAGACTTCTTGGATGTTGCACTAAAGGTCCAGAGAGAATCCTTGTTTATGAATACATGGCAAATAGCAGCCTTGACAGATTCTTATTTGGTGAGAAGAAAGGTTCTCTAAACTGGAAACAAAGGTATGATATAATTTTAGGCACAGCAAGAGGTCTTGCCTATCTTCATGAGGATTTCCATGTTTGTATCATGCATAGAGATATAAAGCCTGGAAATATCTTATTGGATGATGAGCTTCAACCAAGAATTGCTGATTTTGGTTTGGCAAGGCTTCTACCTGAGGACAAATCTCACCTTAGCACAAGATTTGCAGGAACATTGGGATATACAGCACCTGAGTATGCAATTCATGGTCAATTATCAGAGAAGGCAGATACCTATAGTTATGGTGTTGTAGTCTTAGAAATCATAAGTGGCCAAAAGAGTAGTGAATTGAAGGAAGATGCTGATGGTGAATTCCTCCTTCAAAGGGCATGGAAGCTATATGAGAGTAACATGCACTTAGAGTTGGTGGACAAGACATTGAAACCTGAAGAGTATGAAGCAGAGGAAGTGAAGAAAACCATAGAGATTGCATTGTTGTGCACTCAACCATCAGCTGCTACAAGGCCAACAATGTCTGAAGTTGTAGCCTTACTCAAAAGCAAGAACTCATTGGGACAAATGAAGCCAACTATGCCTGTCTTTGTTCAATCTAACATTATTAGGTCACAACCAGATACCTCTACCTCTACCTCAACTGGTGCTTCCTCCATATCTAATGCTACTGCTTCCACTTCTATATTATCAGCTAGATGA 1983 0.4186 MLKPLNNKLRALTFTIIASLWSQNWTLFFHGVLGGDPQTLLLNKGCSQYNATNLSNFNQNLNSTLSDLRNQSISKDFGTAQHAVGADPVYAMFQCRDYLSEADCAACVAVAATQIRNCSAGANGARVIYDGCFIRYESNGFFDQTTLPGNSMICGNKTASGGGATTFNGVAQQVLKDLLTATPKIHGFFAATKTLVGGGGGAIYAIAQCAQTVSESGCLDCLTVGFNNIQSCLPNTDGRAFDAGCFMRYSLTPFFADNQTIDITPYLKQGGSSKKGAIIGGVVGGVVVLVILFALFAWLQRNKKARKVPRGDILGATELKGPVIYRYKDLKSATKNFSDENKLGEGGFGGVYKGTLKNGKVVAVKKLILDQSGKMDQSFESEVRLISNVHHRNLVRLLGCCTKGPERILVYEYMANSSLDRFLFGEKKGSLNWKQRYDIILGTARGLAYLHEDFHVCIMHRDIKPGNILLDDELQPRIADFGLARLLPEDKSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGVVVLEIISGQKSSELKEDADGEFLLQRAWKLYESNMHLELVDKTLKPEEYEAEEVKKTIEIALLCTQPSAATRPTMSEVVALLKSKNSLGQMKPTMPVFVQSNIIRSQPDTSTSTSTGASSISNATASTSILSAR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1642 660 SUPERFAMILY Protein kinase-like (PK-like) 321 627 IPR011009 -
Aev01g1642 660 Gene3D - 150 254 IPR038408 -
Aev01g1642 660 Gene3D - 38 141 IPR038408 -
Aev01g1642 660 Pfam Protein kinase domain 338 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g1642 660 SMART serkin_6 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g1642 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Aev01g1642 660 Gene3D Transferase(Phosphotransferase) domain 1 414 622 - -
Aev01g1642 660 Pfam Salt stress response/antifungal 162 250 IPR002902 -
Aev01g1642 660 Pfam Salt stress response/antifungal 46 138 IPR002902 -
Aev01g1642 660 CDD STKc_IRAK 343 609 - -
Aev01g1642 660 ProSiteProfiles Gnk2-homologous domain profile. 148 254 IPR002902 -
Aev01g1642 660 ProSitePatterns Protein kinases ATP-binding region signature. 343 366 IPR017441 GO:0005524
Aev01g1642 660 ProSiteProfiles Gnk2-homologous domain profile. 39 141 IPR002902 -
Aev01g1642 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 645 - -
Aev01g1642 660 MobiDBLite consensus disorder prediction 634 660 - -
Aev01g1642 660 ProSiteProfiles Protein kinase domain profile. 337 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g1642 660 Gene3D Phosphorylase Kinase; domain 1 303 413 - -
Aev01g1642 660 Gene3D Single helix bin 267 302 - -
Aev01g1642 660 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 34 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1642 Aev-Chr1 20414589 20428579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1642 33 654 Receptor kinase-like Gene Family AT1G70520 36.089 5.26e-129 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aev01g1642 Pkinase 9.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1642 - - gmx:100813585 962.6